RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 SH3GL2Q99962 352 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 FRMPD2Q68DX3 1309 aaPredicted RBP11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 FBXL16Q8N461 479 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 TBCKQ8TEA7 893 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 PRCCQ92733 491 aaPredicted RBP11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 TMEM260Q9NX78 707 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 DBR1Q9UK59 544 aaKnown RBP11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
PRPF38B-201ENST00000370021 HEG1Q9ULI3 1381 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 KLRF2D3W0D1 207 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 SHOX2O60902 331 aaPredicted RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 GCFC2P16383 781 aaKnown RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 FLT3P36888 993 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 CALCRLQ16602 461 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 PRMT1Q99873 361 aaKnown RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 AZI2Q9H6S1 392 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 ACTR5Q9H9F9 607 aaPredicted RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 ANKRD62A6NC57 917 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 CHN1P15882 459 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 LACTBP83111 547 aaPredicted RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 CHRNDQ07001 517 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 ADAM9Q13443 819 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 CCDC6Q16204 474 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 NUGGCQ68CJ6 796 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 MYOCDQ8IZQ8 938 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 SLC17A8Q8NDX2 589 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 RPGRQ92834 1020 aaKnown RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 GLG1Q92896 1179 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 ZNF622Q969S3 477 aaKnown RBP eCLIP11.38□□□□□ -0.593e-7■■■□□ 19.2
PRPF38B-201ENST00000370021 COA7Q96BR5 231 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 RAB34Q9BZG1 259 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 C6orf50Q9HD87 102 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 PCDHA4Q9UN74 947 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 KIF1CO43896 1103 aaKnown RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 ACSL3O95573 720 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 ERVK-9P63128 1117 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 TRIP13Q15645 432 aaPredicted RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 SPRED3Q2MJR0 410 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 GIGYF2Q6Y7W6 1299 aaKnown RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 MAPKAPK5Q8IW41 473 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 GIMAP8Q8ND71 665 aaPredicted RBP11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 PSMD1Q99460 953 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 TSKSQ9UJT2 592 aa11.38□□□□□ -0.59
PRPF38B-201ENST00000370021 OVOS2A0A0G2JMS6 1433 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 A0A1W2PRG0 241 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 PGRMC1O00264 195 aaKnown RBP11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 CLIC2O15247 247 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 GFPT2O94808 682 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 TRIM37O94972 964 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 FSBPO95073 299 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 TROAPQ12815 778 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 ALKBH5Q6P6C2 394 aaKnown RBP11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 FMO2Q99518 471 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 OSBPL7Q9BZF2 842 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 SEMA6BQ9H3T3 888 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 EVI5O60447 810 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 ANP32DO95626 131 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 KCNQ4P56696 695 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 SMIM5Q71RC9 77 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 CCDC105Q8IYK2 499 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 ZNF507Q8TCN5 953 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 CHMP6Q96FZ7 201 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 SPATS2LQ9NUQ6 558 aaKnown RBP11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 NPHP3-ACAD11A0A0J9YXS1 232 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 MEIS1O00470 390 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 CAND2O75155 1236 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 LGR5O75473 907 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 ATP11AP98196 1134 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 CDC37Q16543 378 aaPredicted RBP11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 IFI16Q16666 785 aaKnown RBP11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 AP1ARQ63HQ0 302 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 LARP4BQ92615 738 aaKnown RBP11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 DDX12PQ92771 950 aa11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 NSRP1Q9H0G5 558 aaKnown RBP11.37□□□□□ -0.59
PRPF38B-201ENST00000370021 SMIM24O75264 130 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 FGFR4P22455 802 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 SNX1Q13596 522 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 TAF11Q15544 211 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 ZNF449Q6P9G9 518 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 IQCKQ8N0W5 287 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 TGFBRAP1Q8WUH2 860 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 SERPINA10Q9UK55 444 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 NOC2LQ9Y3T9 749 aaKnown RBP11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 F8W031 263 aaPredicted RBP11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 LRRN2O75325 713 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 PICALMQ13492 652 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 ANKRD20A8PQ5CZ79 823 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 CAPRIN2Q6IMN6 1127 aaKnown RBP11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 PHLDB2Q86SQ0 1253 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 LRRC34Q8IZ02 419 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 ISCA1Q9BUE6 129 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 PANK4Q9NVE7 773 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 TMOD4Q9NZQ9 345 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 ANKIB1Q9P2G1 1089 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms