RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RPGRIP1Q96KN7 1286 aa17.28■□□□□ 0.36
VAMP4-202ENST00000367740 BARX2Q9UMQ3 279 aaPredicted RBP17.28■□□□□ 0.36
VAMP4-202ENST00000367740 PLXNA4Q9HCM2 1894 aa17.28■□□□□ 0.36
VAMP4-202ENST00000367740 FRMPD2Q68DX3 1309 aaPredicted RBP17.27■□□□□ 0.36
VAMP4-202ENST00000367740 KRT37O76014 449 aa17.27■□□□□ 0.36
VAMP4-202ENST00000367740 HOXD8P13378 290 aaPredicted RBP17.27■□□□□ 0.36
VAMP4-202ENST00000367740 NOVP48745 357 aa17.27■□□□□ 0.36
VAMP4-202ENST00000367740 PPTC7Q8NI37 304 aa17.27■□□□□ 0.36
VAMP4-202ENST00000367740 DDX41Q9UJV9 622 aaKnown RBP17.27■□□□□ 0.36
VAMP4-202ENST00000367740 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.27■□□□□ 0.36
VAMP4-202ENST00000367740 NCOR2Q9Y618 2525 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 WDR19Q8NEZ3 1342 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 TSPY2A6NKD2 308 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 CTSHP09668 335 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 DNAJB1P25685 340 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 PPARAQ07869 468 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 FRMD5Q7Z6J6 570 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 ADSSL1Q8N142 457 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 RIPOR3Q96MK2 946 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 PLAGL2Q9UPG8 496 aa17.26■□□□□ 0.35
VAMP4-202ENST00000367740 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
VAMP4-202ENST00000367740 HOXC8P31273 242 aa17.25■□□□□ 0.35
VAMP4-202ENST00000367740 TMEM105Q8N8V8 129 aa17.25■□□□□ 0.35
VAMP4-202ENST00000367740 KBTBD3Q8NAB2 608 aa17.25■□□□□ 0.35
VAMP4-202ENST00000367740 APBB2Q92870 758 aa17.25■□□□□ 0.35
VAMP4-202ENST00000367740 NKD2Q969F2 451 aaPredicted RBP17.25■□□□□ 0.35
VAMP4-202ENST00000367740 PPP2R3CQ969Q6 453 aa17.25■□□□□ 0.35
VAMP4-202ENST00000367740 GPCPD1Q9NPB8 672 aa17.25■□□□□ 0.35
VAMP4-202ENST00000367740 COL20A1Q9P218 1284 aa17.25■□□□□ 0.35
VAMP4-202ENST00000367740 RNF113AO15541 343 aaKnown RBP17.24■□□□□ 0.35
VAMP4-202ENST00000367740 RAB11FIP3O75154 756 aa17.24■□□□□ 0.35
VAMP4-202ENST00000367740 SLC3A2P08195 630 aaKnown RBP17.24■□□□□ 0.35
VAMP4-202ENST00000367740 ATF7P17544 494 aaPredicted RBP17.24■□□□□ 0.35
VAMP4-202ENST00000367740 NRIP1P48552 1158 aa17.24■□□□□ 0.35
VAMP4-202ENST00000367740 LAMC2Q13753 1193 aa17.24■□□□□ 0.35
VAMP4-202ENST00000367740 SIRT2Q8IXJ6 389 aa17.24■□□□□ 0.35
VAMP4-202ENST00000367740 SUSD6Q92537 303 aa17.24■□□□□ 0.35
VAMP4-202ENST00000367740 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
VAMP4-202ENST00000367740 PLVAPQ9BX97 442 aa17.24■□□□□ 0.35
VAMP4-202ENST00000367740 PNMA2Q9UL42 364 aa17.24■□□□□ 0.35
VAMP4-202ENST00000367740 TTC3P53804 2025 aa17.24■□□□□ 0.35
VAMP4-202ENST00000367740 C17orf102A2RUQ5 167 aa17.23■□□□□ 0.35
VAMP4-202ENST00000367740 TREHO43280 583 aa17.23■□□□□ 0.35
VAMP4-202ENST00000367740 CAND2O75155 1236 aa17.23■□□□□ 0.35
VAMP4-202ENST00000367740 STXBP2Q15833 593 aa17.23■□□□□ 0.35
VAMP4-202ENST00000367740 RGS22Q8NE09 1264 aa17.23■□□□□ 0.35
VAMP4-202ENST00000367740 P2RX5Q93086 422 aa17.23■□□□□ 0.35
VAMP4-202ENST00000367740 ZNF689Q96CS4 500 aaPredicted RBP17.23■□□□□ 0.35
VAMP4-202ENST00000367740 TAAR1Q96RJ0 339 aa17.23■□□□□ 0.35
VAMP4-202ENST00000367740 MYH6P13533 1939 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 ITGB1P05556 798 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 BTG3Q14201 252 aaPredicted RBP17.22■□□□□ 0.35
VAMP4-202ENST00000367740 HSDL1Q3SXM5 330 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 USH1GQ495M9 461 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 MCTP2Q6DN12 878 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 RBM23Q86U06 439 aaKnown RBP17.22■□□□□ 0.35
VAMP4-202ENST00000367740 SYTL5Q8TDW5 730 aaPredicted RBP17.22■□□□□ 0.35
VAMP4-202ENST00000367740 NSUN6Q8TEA1 469 aaKnown RBP17.22■□□□□ 0.35
VAMP4-202ENST00000367740 TBC1D5Q92609 795 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 C16orf70Q9BSU1 422 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 NACAP1Q9BZK3 213 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 NAPBQ9H115 298 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 MRVI1Q9Y6F6 885 aa17.22■□□□□ 0.35
VAMP4-202ENST00000367740 PPFIA4O75335 1185 aa17.21■□□□□ 0.35
VAMP4-202ENST00000367740 RBM10P98175 930 aaKnown RBP17.21■□□□□ 0.35
VAMP4-202ENST00000367740 CTDSPL2Q05D32 466 aa17.21■□□□□ 0.35
VAMP4-202ENST00000367740 SPPL3Q8TCT6 385 aa17.21■□□□□ 0.35
VAMP4-202ENST00000367740 RMDN1Q96DB5 314 aa17.21■□□□□ 0.35
VAMP4-202ENST00000367740 IWS1Q96ST2 819 aa17.21■□□□□ 0.35
VAMP4-202ENST00000367740 PCDHGC5Q9Y5F6 944 aa17.21■□□□□ 0.35
VAMP4-202ENST00000367740 EP300Q09472 2414 aaPredicted RBP17.2■□□□□ 0.34
VAMP4-202ENST00000367740 SORBS3O60504 671 aa17.2■□□□□ 0.34
VAMP4-202ENST00000367740 ZFYP08048 801 aaPredicted RBP17.2■□□□□ 0.34
VAMP4-202ENST00000367740 SMIM10L2AP0DMW4 78 aa17.2■□□□□ 0.34
VAMP4-202ENST00000367740 SMIM10L2BP0DMW5 78 aa17.2■□□□□ 0.34
VAMP4-202ENST00000367740 PDHBP11177 359 aa17.2■□□□□ 0.34
VAMP4-202ENST00000367740 MYSM1Q5VVJ2 828 aa17.2■□□□□ 0.34
VAMP4-202ENST00000367740 ZBTB33Q86T24 672 aa17.2■□□□□ 0.34
VAMP4-202ENST00000367740 VN1R2Q8NFZ6 395 aa17.2■□□□□ 0.34
VAMP4-202ENST00000367740 RMDN3Q96TC7 470 aa17.2■□□□□ 0.34
VAMP4-202ENST00000367740 SEC62Q99442 399 aaKnown RBP17.2■□□□□ 0.34
VAMP4-202ENST00000367740 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
VAMP4-202ENST00000367740 MRPL42Q9Y6G3 142 aaKnown RBP17.2■□□□□ 0.34
VAMP4-202ENST00000367740 CFAP47Q6ZTR5 3102 aa17.19■□□□□ 0.34
VAMP4-202ENST00000367740 RANBP6O60518 1105 aaKnown RBP17.19■□□□□ 0.34
VAMP4-202ENST00000367740 HMMRO75330 724 aa17.19■□□□□ 0.34
VAMP4-202ENST00000367740 EIF2AK2P19525 551 aaKnown RBP17.19■□□□□ 0.34
VAMP4-202ENST00000367740 POF1BQ8WVV4 589 aa17.19■□□□□ 0.34
VAMP4-202ENST00000367740 SPATA33Q96N06 139 aa17.19■□□□□ 0.34
VAMP4-202ENST00000367740 RNPEPQ9H4A4 650 aa17.19■□□□□ 0.34
VAMP4-202ENST00000367740 MYO10Q9HD67 2058 aa17.19■□□□□ 0.34
VAMP4-202ENST00000367740 DOCK5Q9H7D0 1870 aa17.18■□□□□ 0.34
VAMP4-202ENST00000367740 FOXP2O15409 715 aa17.18■□□□□ 0.34
VAMP4-202ENST00000367740 EIF3JO75822 258 aaKnown RBP17.18■□□□□ 0.34
VAMP4-202ENST00000367740 DGKIO75912 1065 aa17.18■□□□□ 0.34
VAMP4-202ENST00000367740 TOP1P11387 765 aaKnown RBP17.18■□□□□ 0.34
VAMP4-202ENST00000367740 ZNF543Q08ER8 600 aa17.18■□□□□ 0.34
VAMP4-202ENST00000367740 NAALADL2Q58DX5 795 aa17.18■□□□□ 0.34
VAMP4-202ENST00000367740 FAM26DQ5JW98 314 aa17.18■□□□□ 0.34
VAMP4-202ENST00000367740 DGLUCYQ7Z3D6 616 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms