RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 BARX1Q9HBU1 254 aaPredicted RBP3.96□□□□□ -1.78
RNU4-42P-201ENST00000364738 RBPJLQ9UBG7 517 aa3.96□□□□□ -1.78
RNU4-42P-201ENST00000364738 GJB6O95452 261 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 FSHBP01225 129 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 C6P13671 934 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 ETFBP38117 255 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 GRIA2P42262 883 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 EPHB4P54760 987 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 MAP4K2Q12851 820 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 VASNQ6EMK4 673 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 CYP4F22Q6NT55 531 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 SPRED1Q7Z699 444 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 TRIM48Q8IWZ4 208 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 SLC16A11Q8NCK7 471 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 PIP4K2CQ8TBX8 421 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 IER2Q9BTL4 223 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 PHF20Q9BVI0 1012 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 JAM3Q9BX67 310 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 ASH2LQ9UBL3 628 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 WASF3Q9UPY6 502 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 TSC22D4Q9Y3Q8 395 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 NPFFR2Q9Y5X5 522 aa3.95□□□□□ -1.78
RNU4-42P-201ENST00000364738 SLC27A2O14975 620 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 GPR42O15529 346 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 FGRP09769 529 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 TACR2P21452 398 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 PPP2CBP62714 309 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 PPP2CAP67775 309 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 GRIN1Q05586 938 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 CDSNQ15517 529 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 PHF19Q5T6S3 580 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 ZNF585AQ6P3V2 769 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 USP53Q70EK8 1073 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 PALM2Q8IXS6 379 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 TTLL11Q8NHH1 800 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 CDK5RAP1Q96SZ6 601 aaKnown RBP3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 KLC2Q9H0B6 622 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 CDIP1Q9H305 208 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 ZNF408Q9H9D4 720 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 CD248Q9HCU0 757 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 SLC6A20Q9NP91 592 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 DLL4Q9NR61 685 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 GPR27Q9NS67 375 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 PPARGC1AQ9UBK2 798 aaKnown RBP3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 ZDHHC9Q9Y397 364 aa3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 R3HCC1Q9Y3T6 440 aaKnown RBP3.94□□□□□ -1.78
RNU4-42P-201ENST00000364738 A0A1W2PQU0 124 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 B4GALT4O60513 344 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 MSCO60682 206 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 CAPNS1P04632 268 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 SELENOPP49908 381 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 NFATC3Q12968 1075 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 SLFN13Q68D06 897 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 RALYLQ86SE5 291 aaKnown RBP3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 PROSER1Q86XN7 944 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 DTX3Q8N9I9 347 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 NUDT10Q8NFP7 164 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 HNRNPLLQ8WVV9 542 aaKnown RBP3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 NUDT11Q96G61 164 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 PTPN18Q99952 460 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 DEF6Q9H4E7 631 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 HSPBP1Q9NZL4 362 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 ADAM29Q9UKF5 820 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 TCAF1Q9Y4C2 921 aa3.93□□□□□ -1.78
RNU4-42P-201ENST00000364738 DLX3O60479 287 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 FBXO21O94952 628 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 COL6A1P12109 1028 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 GRK2P25098 689 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 GRK3P35626 688 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 GDF5P43026 501 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 ARID5AQ03989 594 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 TUSC3Q13454 348 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 SMAD2Q15796 467 aaKnown RBP3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 SKIDA1Q1XH10 827 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 KIZQ2M2Z5 673 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 OTOP3Q7RTS5 596 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 RBM12BQ8IXT5 1001 aaKnown RBP3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 CELF2-AS1Q8N7Q2 184 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 DNERQ8NFT8 737 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 SCAND2PQ9GZW5 306 aaPredicted RBP3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 MEGF9Q9H1U4 602 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 ST7Q9NRC1 585 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 NUB1Q9Y5A7 615 aa3.92□□□□□ -1.78
RNU4-42P-201ENST00000364738 MUSKO15146 869 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 SUV39H1O43463 412 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 KLHL18O94889 574 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 KNG1P01042 644 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 CHGBP05060 677 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 GNAT1P11488 350 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 COL6A2P12110 1019 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 DNAJA1P31689 397 aaKnown RBP3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 GLRBP48167 497 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 SPIRE1Q08AE8 756 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 HSP90AA2PQ14568 343 aaPredicted RBP3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 DDR2Q16832 855 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 PAN2Q504Q3 1202 aaKnown RBP3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 CRIP3Q6Q6R5 217 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 RSPO2Q6UXX9 243 aaPredicted RBP3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 LBX2Q6XYB7 198 aa3.91□□□□□ -1.78
RNU4-42P-201ENST00000364738 IFNL2Q8IZJ0 200 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms