RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SLC10A5Q5PT55 438 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 ANKRD42Q8N9B4 389 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 MCPH1Q8NEM0 835 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 PPP1R16BQ96T49 567 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 SGK1O00141 431 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 TCP1P17987 556 aaKnown RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 DYNLL1P63167 89 aaKnown RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 GBP7Q8N8V2 638 aaPredicted RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 CABS1Q96KC9 395 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 MMP19Q99542 508 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 FOXP1Q9H334 677 aaPredicted RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 OLA1Q9NTK5 396 aaKnown RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 LMBRD1Q9NUN5 540 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 NARFQ9UHQ1 456 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 ZNF75DP51815 510 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 COG7P83436 770 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 ZNF667Q5HYK9 610 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 DCLK2Q8N568 766 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 BEST2Q8NFU1 509 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 ZNF653Q96CK0 615 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 DYRK4Q9NR20 520 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 STRIP2Q9ULQ0 834 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 STMN1P16949 149 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 CA4P22748 312 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 GTF2A1P52655 376 aaPredicted RBP11.85□□□□□ -0.51
CLIP1-203ENST00000361654 AP3B2Q13367 1082 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 SCN4BQ8IWT1 228 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 TRIM42Q8IWZ5 723 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 TBCKQ8TEA7 893 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 MID2Q9UJV3 735 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 SSH2Q76I76 1423 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 NLRP1Q9C000 1473 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 A0A0D9SFI3 127 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 ECE2O60344 883 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 GH2P01242 217 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 MYL1P05976 194 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 KCNQ4P56696 695 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 MAPK6Q16659 721 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 CBX8Q9HC52 389 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 ARHGAP42A6NI28 874 aa11.85□□□□□ -0.51
CLIP1-203ENST00000361654 DHTKD1Q96HY7 919 aaPredicted RBP11.85□□□□□ -0.51
CLIP1-203ENST00000361654 PUS3Q9BZE2 481 aaKnown RBP11.85□□□□□ -0.51
CLIP1-203ENST00000361654 ADORA1P30542 326 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 MXI1P50539 228 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 SRRM1Q8IYB3 904 aaKnown RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 VPS39Q96JC1 886 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 LRGUKQ96M69 825 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 KIAA1468Q9P260 1216 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 KLHL14Q9P2G3 628 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 RPAP1Q9BWH6 1393 aaPredicted RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 TXNDC9O14530 226 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 CHEK2O96017 543 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 CTNNA1P35221 906 aaKnown RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 SPATA1Q5VX52 437 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 SNRNP48Q6IEG0 339 aaKnown RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 KRBA2Q6ZNG9 492 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 RNF217Q8TC41 542 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 SYMPKQ92797 1274 aaKnown RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 MTRQ99707 1265 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 C2orf40Q9H1Z8 148 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 ATP6V0A4Q9HBG4 840 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 KIAA1586Q9HCI6 787 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 MAP3K20Q9NYL2 800 aaKnown RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 ZNF212Q9UDV6 495 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 ABCC12Q96J65 1359 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 MESDQ14696 234 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 TAF1CQ15572 869 aaPredicted RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 ACAP3Q96P50 834 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 RMDN3Q96TC7 470 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 ZFYVE28Q9HCC9 887 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 TBC1D22BQ9NU19 505 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 TTI1O43156 1089 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 RFC1P35251 1148 aaPredicted RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 FBXW4P57775 412 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 PTK2BQ14289 1009 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 KCTD6Q8NC69 237 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 CCHCR1Q8TD31 782 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 DACT3Q96B18 629 aaPredicted RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 GCOM2Q9BZD3 368 aaPredicted RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 HEG1Q9ULI3 1381 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 MOCS3O95396 460 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 CASP2P42575 452 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 CDK8P49336 464 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 RBM46Q8TBY0 533 aaKnown RBP11.84□□□□□ -0.51
CLIP1-203ENST00000361654 PIGBQ92521 554 aa11.84□□□□□ -0.51
CLIP1-203ENST00000361654 PPFIA2O75334 1257 aa11.83□□□□□ -0.52
CLIP1-203ENST00000361654 KRT1P04264 644 aa11.83□□□□□ -0.52
CLIP1-203ENST00000361654 DRP2Q13474 957 aa11.83□□□□□ -0.52
CLIP1-203ENST00000361654 WHAMMP3Q1A5X7 153 aa11.83□□□□□ -0.52
CLIP1-203ENST00000361654 PHLDB3Q6NSJ2 640 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms