RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 PEX3P56589 373 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 SARNPP82979 210 aaKnown RBP20.24■□□□□ 0.83
CLIP2-202ENST00000361545 MARCH10Q8NA82 808 aaPredicted RBP20.24■□□□□ 0.83
CLIP2-202ENST00000361545 HAUS4Q9H6D7 363 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 EHHADHQ08426 723 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 SCARF1Q14162 830 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 HAUS1Q96CS2 278 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 RNF146Q9NTX7 359 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 BFSP1Q12934 665 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 RESTQ13127 1097 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 AP3B2Q13367 1082 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 RCSD1Q6JBY9 416 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 MICALL1Q8N3F8 863 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 DDX23Q9BUQ8 820 aaKnown RBP20.23■□□□□ 0.83
CLIP2-202ENST00000361545 ZNF148Q9UQR1 794 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 SPHKAPQ2M3C7 1700 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 MAN2A1Q16706 1144 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 PTPREP23469 700 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 FBXO40Q9UH90 709 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 SPATA31A1Q5TZJ5 1347 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 F5H6K3 240 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 KLRC3Q07444 240 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 LRRC8AQ8IWT6 810 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 ABCB11O95342 1321 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 SPATA31A6Q5VVP1 1343 aa20.23■□□□□ 0.83
CLIP2-202ENST00000361545 SCARA5Q6ZMJ2 495 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 GCNT4Q9P109 453 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 POTEMA6NI47 508 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 H7C0C1 242 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 ATP5OP48047 213 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 PAGE5Q96GU1 130 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 UBE2TQ9NPD8 197 aaPredicted RBP20.22■□□□□ 0.83
CLIP2-202ENST00000361545 BANK1Q8NDB2 785 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 HINFPQ9BQA5 517 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 TRPM1Q7Z4N2 1603 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 LMNB1P20700 586 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 TTBK2Q6IQ55 1244 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 NRKQ7Z2Y5 1582 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 ZNF653Q96CK0 615 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 SH3GLB2Q9NR46 395 aa20.22■□□□□ 0.83
CLIP2-202ENST00000361545 TOB2Q14106 344 aaPredicted RBP20.21■□□□□ 0.83
CLIP2-202ENST00000361545 CATSPER4Q7RTX7 472 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 SRGAP1Q7Z6B7 1085 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 GRK7Q8WTQ7 553 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 MSTO1Q9BUK6 570 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 MXI1P50539 228 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 TPD52P55327 224 aaPredicted RBP20.21■□□□□ 0.83
CLIP2-202ENST00000361545 MTMR3Q13615 1198 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 THNSL1Q8IYQ7 743 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 PFKFB3Q16875 520 aaPredicted RBP20.21■□□□□ 0.83
CLIP2-202ENST00000361545 PHLDB2Q86SQ0 1253 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 SAMSN1Q9NSI8 373 aaKnown RBP20.21■□□□□ 0.83
CLIP2-202ENST00000361545 GSG1L2A8MUP6 293 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 GFPT2O94808 682 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 AFAP1L2Q8N4X5 818 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 MGARPQ8TDB4 240 aa20.21■□□□□ 0.83
CLIP2-202ENST00000361545 BZW2Q9Y6E2 419 aaKnown RBP20.21■□□□□ 0.83
CLIP2-202ENST00000361545 NDUFAB1O14561 156 aa20.2■□□□□ 0.83
CLIP2-202ENST00000361545 KIF11P52732 1056 aa20.2■□□□□ 0.83
CLIP2-202ENST00000361545 RBL2Q08999 1139 aa20.2■□□□□ 0.83
CLIP2-202ENST00000361545 LLGL1Q15334 1064 aa20.2■□□□□ 0.83
CLIP2-202ENST00000361545 RPF1Q9H9Y2 349 aaKnown RBP20.2■□□□□ 0.83
CLIP2-202ENST00000361545 MAP7D3Q8IWC1 876 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 FAM133AQ8N9E0 248 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 TMEM260Q9NX78 707 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 MYL1P05976 194 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 MYO1EQ12965 1108 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 CROCCP2Q86T23 111 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 CCDC94Q9BW85 323 aaPredicted RBP20.2■□□□□ 0.82
CLIP2-202ENST00000361545 POLD4Q9HCU8 107 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 WHAMMP3Q1A5X7 153 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 ARL6IP4Q66PJ3 421 aaKnown RBP20.2■□□□□ 0.82
CLIP2-202ENST00000361545 ANKRD42Q8N9B4 389 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 UHMK1Q8TAS1 419 aaKnown RBP20.2■□□□□ 0.82
CLIP2-202ENST00000361545 NSUN6Q8TEA1 469 aaKnown RBP20.2■□□□□ 0.82
CLIP2-202ENST00000361545 TRIM28Q13263 835 aaKnown RBP20.2■□□□□ 0.82
CLIP2-202ENST00000361545 RFX6Q8HWS3 928 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 ZNF710Q8N1W2 664 aa20.2■□□□□ 0.82
CLIP2-202ENST00000361545 I3L4J1 428 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 NT5C2P49902 561 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 MICALL2Q8IY33 904 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 ATP2A3Q93084 1043 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 CCNE1P24864 410 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 JAK3P52333 1124 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 AKR1B1P15121 316 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 CTNNA1P35221 906 aaKnown RBP20.19■□□□□ 0.82
CLIP2-202ENST00000361545 RINT1Q6NUQ1 792 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 TCP1P17987 556 aaKnown RBP20.19■□□□□ 0.82
CLIP2-202ENST00000361545 SAT1P21673 171 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 TMED8Q6PL24 325 aaPredicted RBP20.19■□□□□ 0.82
CLIP2-202ENST00000361545 RPGRIP1Q96KN7 1286 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 LY9Q9HBG7 655 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 NRBP1Q9UHY1 535 aa20.19■□□□□ 0.82
CLIP2-202ENST00000361545 MAPK4P31152 587 aa20.18■□□□□ 0.82
CLIP2-202ENST00000361545 GTF2A1P52655 376 aaPredicted RBP20.18■□□□□ 0.82
CLIP2-202ENST00000361545 OXER1Q8TDS5 423 aa20.18■□□□□ 0.82
CLIP2-202ENST00000361545 OGFRQ9NZT2 677 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms