RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 GSG1L2A8MUP6 293 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 ATP8B3O60423 1300 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 OATP04181 439 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 NEDD9Q14511 834 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 FAM83BQ5T0W9 1011 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 NLRP7Q8WX94 980 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 MRPL47Q9HD33 250 aaKnown RBP14.67□□□□□ -0.06
LDB3-202ENST00000361373 CNTNAP4Q9C0A0 1308 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 A6NJR5 290 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 VPS52Q8N1B4 723 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 BBS5Q8N3I7 341 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 SLC16A10Q8TF71 515 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 CEP95Q96GE4 821 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 PAGE5Q96GU1 130 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 PKNOX2Q96KN3 472 aa14.67□□□□□ -0.06
LDB3-202ENST00000361373 CAMTA2O94983 1202 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 CSF1RP07333 972 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 HPDP32754 393 aaPredicted RBP14.66□□□□□ -0.06
LDB3-202ENST00000361373 DPCR1Q3MIW9 517 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 PRKAG2Q9UGJ0 569 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 NRXN1Q9ULB1 1477 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 USP42Q9H9J4 1324 aaKnown RBP14.66□□□□□ -0.06
LDB3-202ENST00000361373 CACNB3P54284 484 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 ZBED6P86452 979 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 MTMR1Q13613 665 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 TOB2Q14106 344 aaPredicted RBP14.66□□□□□ -0.06
LDB3-202ENST00000361373 CCDC170Q8IYT3 715 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 NEDD4P46934 1319 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 SPATA31A5Q5VU36 1347 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 SPATA31A7Q8IWB4 1347 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 I3L4J1 428 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 HOXA13P31271 388 aaPredicted RBP14.66□□□□□ -0.06
LDB3-202ENST00000361373 CASP14P31944 242 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
LDB3-202ENST00000361373 SPATA24Q86W54 205 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 F5H6K3 240 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 KLRC3Q07444 240 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 BFSP1Q12934 665 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 UNC13DQ70J99 1090 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 PALM2Q8IXS6 379 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 VPS37BQ9H9H4 285 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 LY9Q9HBG7 655 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 RNF181Q9P0P0 153 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 RNF14Q9UBS8 474 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 PXDNLA1KZ92 1463 aa14.66□□□□□ -0.06
LDB3-202ENST00000361373 LARGE1O95461 756 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 TBC1D16Q8TBP0 767 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 BHMT2Q9H2M3 363 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 TTLL3Q9Y4R7 772 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 PVALEFA0A1B0GWK0 134 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 SNAP23O00161 211 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 MEIS1O00470 390 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 TBC1D8O95759 1140 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 HSPA6P17066 643 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 ADCY8P40145 1251 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 PRELPP51888 382 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 FASTKD5Q7L8L6 764 aaKnown RBP14.65□□□□□ -0.06
LDB3-202ENST00000361373 ATG9AQ7Z3C6 839 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 APOL6Q9BWW8 343 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 TYW5A2RUC4 315 aaKnown RBP14.65□□□□□ -0.06
LDB3-202ENST00000361373 CD2BP2O95400 341 aaKnown RBP14.65□□□□□ -0.06
LDB3-202ENST00000361373 KRT71Q3SY84 523 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 DESI2Q9BSY9 194 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 TFAMQ00059 246 aaKnown RBP14.65□□□□□ -0.06
LDB3-202ENST00000361373 LRRC41Q15345 812 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 ELF2Q15723 593 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 RESP18Q5W5W9 173 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 PRR5LQ6MZQ0 368 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 ARMCX2Q7L311 632 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 GPIHBP1Q8IV16 184 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 MARCH10Q8NA82 808 aaPredicted RBP14.65□□□□□ -0.06
LDB3-202ENST00000361373 RNF146Q9NTX7 359 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 TECPR2O15040 1411 aa14.65□□□□□ -0.06
LDB3-202ENST00000361373 EFCAB8A8MWE9 144 aa14.65□□□□□ -0.07
LDB3-202ENST00000361373 ENTPD3O75355 529 aa14.65□□□□□ -0.07
LDB3-202ENST00000361373 EN1Q05925 392 aaPredicted RBP14.65□□□□□ -0.07
LDB3-202ENST00000361373 CUL4BQ13620 913 aa14.65□□□□□ -0.07
LDB3-202ENST00000361373 PROM2Q8N271 834 aa14.65□□□□□ -0.07
LDB3-202ENST00000361373 KRT12Q99456 494 aa14.65□□□□□ -0.07
LDB3-202ENST00000361373 RPF1Q9H9Y2 349 aaKnown RBP14.65□□□□□ -0.07
LDB3-202ENST00000361373 BARHL2Q9NY43 387 aa14.65□□□□□ -0.07
LDB3-202ENST00000361373 PASKQ96RG2 1323 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 SBK1Q52WX2 424 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 SNRNP48Q6IEG0 339 aaKnown RBP14.64□□□□□ -0.07
LDB3-202ENST00000361373 SH3BP5O60239 455 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 HSPA1LP34931 641 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 RNASELQ05823 741 aaKnown RBP14.64□□□□□ -0.07
LDB3-202ENST00000361373 C12orf60Q5U649 245 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 AIFM3Q96NN9 605 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 ATP6V0A4Q9HBG4 840 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 SEL1LQ9UBV2 794 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 SLC12A6Q9UHW9 1150 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 GOLGA8CPA6NN73 597 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 NDUFAB1O14561 156 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 ABL1P00519 1130 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 USP11P51784 963 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 ARHGAP4P98171 946 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 SPP2Q13103 211 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 CYB5R4Q7L1T6 521 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 RSRC2Q7L4I2 434 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms