RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 SF3A1Q15459 793 aaKnown RBP8.64□□□□□ -1.03
CCL28-201ENST00000361115 DIXDC1Q155Q3 683 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 AMOTL1Q8IY63 956 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 EFCAB13Q8IY85 973 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 SLC43A3Q8NBI5 491 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 TIFAQ96CG3 184 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 XAGE2Q96GT9 111 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 CLIC6Q96NY7 704 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 NDUFB9Q9Y6M9 179 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 GOLGA6L9A6NEM1 432 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 POLR3DP05423 398 aaPredicted RBP8.64□□□□□ -1.03
CCL28-201ENST00000361115 CCDC172P0C7W6 258 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 PFKFB1P16118 471 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 COL9A1P20849 921 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 DSG3P32926 999 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 FOXK2Q01167 660 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 LRRC41Q15345 812 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 RCSD1Q6JBY9 416 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 CCDC91Q7Z6B0 441 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 ZNF513Q8N8E2 541 aaPredicted RBP8.64□□□□□ -1.03
CCL28-201ENST00000361115 KLHDC9Q8NEP7 349 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 FAM71BQ8TC56 605 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 SAMD11Q96NU1 681 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 SERPINB13Q9UIV8 391 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 FAM184BQ9ULE4 1060 aa8.64□□□□□ -1.03
CCL28-201ENST00000361115 A0A087WUV0 522 aaPredicted RBP8.63□□□□□ -1.03
CCL28-201ENST00000361115 PLA2G6O60733 806 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 DUSP11O75319 330 aaKnown RBP8.63□□□□□ -1.03
CCL28-201ENST00000361115 BAIAP3O94812 1187 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 FCER1AP12319 257 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 FDPSP14324 419 aaKnown RBP8.63□□□□□ -1.03
CCL28-201ENST00000361115 CCND3P30281 292 aaPredicted RBP8.63□□□□□ -1.03
CCL28-201ENST00000361115 PHKA1P46020 1223 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 MYL5Q02045 173 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 SENP6Q9GZR1 1112 aaPredicted RBP8.63□□□□□ -1.03
CCL28-201ENST00000361115 IL23AQ9NPF7 189 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 LZTFL1Q9NQ48 299 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 FAM50BQ9Y247 325 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 CEP83Q9Y592 693 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 STX10O60499 249 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 LIG3P49916 1009 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 CCDC155Q8N6L0 562 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 OTUD6BQ8N6M0 293 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 CEP89Q96ST8 783 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 SLC9A7Q96T83 725 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 SPATC1LQ9H0A9 340 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 TBX21Q9UL17 535 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 SPDYE16A6NNV3 312 aaPredicted RBP8.63□□□□□ -1.03
CCL28-201ENST00000361115 SPTLC2O15270 562 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 PDE4BQ07343 736 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 PNOCQ13519 176 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 ABCB5Q2M3G0 1257 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 DNAJC21Q5F1R6 531 aaKnown RBP8.63□□□□□ -1.03
CCL28-201ENST00000361115 RINLQ6ZS11 566 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 CHST13Q8NET6 341 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 GJB4Q9NTQ9 266 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 CDC23Q9UJX2 597 aa8.63□□□□□ -1.03
CCL28-201ENST00000361115 SNAP23O00161 211 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 NCK2O43639 380 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 ERLIN1O75477 346 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 ACTN1P12814 892 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 CDK7P50613 346 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 GJA9P57773 515 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 HSP90B2PQ58FF3 399 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 KCNV1Q6PIU1 500 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 DPP9Q86TI2 863 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 GOPCQ9HD26 462 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 TUBE1Q9UJT0 475 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 SOWAHDA6NJG2 315 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 RNF40O75150 1001 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 SYF2O95926 243 aaKnown RBP8.62□□□□□ -1.03
CCL28-201ENST00000361115 SUPT20HL2P0C7V6 817 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 CDC27P30260 824 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 G3BP1Q13283 466 aaKnown RBP eCLIP8.62□□□□□ -1.03
CCL28-201ENST00000361115 SHHQ15465 462 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 ZNF792Q3KQV3 632 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 FBXW10Q5XX13 1052 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 CHST3Q7LGC8 479 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 MAML3Q96JK9 1138 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
CCL28-201ENST00000361115 ZNF287Q9HBT7 754 aa8.62□□□□□ -1.03
CCL28-201ENST00000361115 NKRFO15226 690 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCL28-201ENST00000361115 PRPF6O94906 941 aaKnown RBP8.61□□□□□ -1.03
CCL28-201ENST00000361115 VCAM1P19320 739 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 MARCKSP29966 332 aaPredicted RBP8.61□□□□□ -1.03
CCL28-201ENST00000361115 HNRNPH1P31943 449 aaKnown RBP8.61□□□□□ -1.03
CCL28-201ENST00000361115 MAP3K12Q12852 859 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 CCDC96Q2M329 555 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 EXOC8Q8IYI6 725 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 CEP112Q8N8E3 955 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 KLHDC4Q8TBB5 520 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 MPHOSPH6Q99547 160 aaKnown RBP8.61□□□□□ -1.03
CCL28-201ENST00000361115 CRNKL1Q9BZJ0 848 aaKnown RBP8.61□□□□□ -1.03
CCL28-201ENST00000361115 ZNF576Q9H609 170 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 DONSONQ9NYP3 566 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 RAI14Q9P0K7 980 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 LRP2BPQ9P2M1 347 aa8.61□□□□□ -1.03
CCL28-201ENST00000361115 JAG2Q9Y219 1238 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms