RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MRPL11Q9Y3B7 192 aaKnown RBP14.1□□□□□ -0.15
GGPS1-202ENST00000358966 TRIM66O15016 1216 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 RHOBTB3O94955 611 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 CCZ1BP86790 482 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 CCZ1P86791 482 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-202ENST00000358966 SATB1Q01826 763 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 PABPC4Q13310 644 aaKnown RBP eCLIP14.09□□□□□ -0.15
GGPS1-202ENST00000358966 VGLL4Q14135 290 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 NSMFQ6X4W1 530 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 ADSSL1Q8N142 457 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 LPAR1Q92633 364 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 VPS16Q9H269 839 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 TAB2Q9NYJ8 693 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 PPP1R9AQ9ULJ8 1098 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 USP2O75604 605 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-202ENST00000358966 FOSP01100 380 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-202ENST00000358966 SKILP12757 684 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 EIF2AK2P19525 551 aaKnown RBP14.09□□□□□ -0.15
GGPS1-202ENST00000358966 CEP135Q66GS9 1140 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-202ENST00000358966 GIMAP8Q8ND71 665 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-202ENST00000358966 CLMNQ96JQ2 1002 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 RMND1Q9NWS8 449 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 ZNF112Q9UJU3 913 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 VAV3Q9UKW4 847 aa14.09□□□□□ -0.15
GGPS1-202ENST00000358966 DNAH12Q6ZR08 3092 aa14.08□□□□□ -0.15
GGPS1-202ENST00000358966 RPS6P62753 249 aaKnown RBP14.08□□□□□ -0.15
GGPS1-202ENST00000358966 CTTNQ14247 550 aaKnown RBP14.08□□□□□ -0.15
GGPS1-202ENST00000358966 Q4G0T1 1027 aa14.08□□□□□ -0.15
GGPS1-202ENST00000358966 CDKAL1Q5VV42 579 aa14.08□□□□□ -0.15
GGPS1-202ENST00000358966 PIGOQ8TEQ8 1089 aa14.08□□□□□ -0.15
GGPS1-202ENST00000358966 C7orf25Q9BPX7 421 aa14.08□□□□□ -0.15
GGPS1-202ENST00000358966 ZHX3Q9H4I2 956 aa14.08□□□□□ -0.15
GGPS1-202ENST00000358966 TRMT1Q9NXH9 659 aaKnown RBP14.08□□□□□ -0.15
GGPS1-202ENST00000358966 VWA5AO00534 786 aa14.08□□□□□ -0.16
GGPS1-202ENST00000358966 SPATA31C1P0DKV0 1188 aa14.08□□□□□ -0.16
GGPS1-202ENST00000358966 ITGB5P18084 799 aa14.08□□□□□ -0.16
GGPS1-202ENST00000358966 CASQ1P31415 396 aa14.08□□□□□ -0.16
GGPS1-202ENST00000358966 ADKP55263 362 aaKnown RBP14.08□□□□□ -0.16
GGPS1-202ENST00000358966 ILDR2Q71H61 639 aa14.08□□□□□ -0.16
GGPS1-202ENST00000358966 IRF2BP1Q8IU81 584 aa14.08□□□□□ -0.16
GGPS1-202ENST00000358966 VSTM4Q8IW00 320 aa14.08□□□□□ -0.16
GGPS1-202ENST00000358966 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.16
GGPS1-202ENST00000358966 PHIPQ8WWQ0 1821 aa14.08□□□□□ -0.16
GGPS1-202ENST00000358966 PLS1Q14651 629 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 KRT31Q15323 416 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 SYCP1Q15431 976 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 KRT26Q7Z3Y9 468 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 CPLX3Q8WVH0 158 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 TRIM47Q96LD4 638 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 TAAR1Q96RJ0 339 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 ZNF446Q9NWS9 450 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 RWDD2AQ9UIY3 292 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 PES1O00541 588 aaKnown RBP14.07□□□□□ -0.16
GGPS1-202ENST00000358966 PLA2G6O60733 806 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 PLA2G4BP0C869 781 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 CIITAP33076 1130 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 KCNB1Q14721 858 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 TREML2Q5T2D2 321 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 LRCH2Q5VUJ6 765 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 CEP120Q8N960 986 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.07□□□□□ -0.16
GGPS1-202ENST00000358966 C16orf45Q96MC5 204 aaPredicted RBP14.07□□□□□ -0.16
GGPS1-202ENST00000358966 SH2D3AQ9BRG2 576 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 CUEDC2Q9H467 287 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 ADARB2Q9NS39 739 aaKnown RBP14.07□□□□□ -0.16
GGPS1-202ENST00000358966 WRAP73Q9P2S5 460 aaPredicted RBP14.07□□□□□ -0.16
GGPS1-202ENST00000358966 STK17AQ9UEE5 414 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 PARP14Q460N5 1801 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 CEP350Q5VT06 3117 aa14.07□□□□□ -0.16
GGPS1-202ENST00000358966 SORBS3O60504 671 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 TNNT1P13805 278 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 CEP55Q53EZ4 464 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 EAPPQ56P03 285 aaPredicted RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 DNAJC21Q5F1R6 531 aaKnown RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 ANKRD40Q6AI12 368 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 SYT10Q6XYQ8 523 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 GPBP1Q86WP2 473 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 SULF1Q8IWU6 871 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 SLFN12Q8IYM2 578 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 DNAJC19Q96DA6 116 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 SRRTQ9BXP5 876 aaKnown RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 CTDP1Q9Y5B0 961 aaPredicted RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 SNCAIPQ9Y6H5 919 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 RLFQ13129 1914 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 POTEJP0CG39 1038 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 MYCLP12524 364 aaPredicted RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 SFPQP23246 707 aaKnown RBP eCLIP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 SNRNP48Q6IEG0 339 aaKnown RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 SYTL5Q8TDW5 730 aaPredicted RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 DCPSQ96C86 337 aaKnown RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 DRC1Q96MC2 740 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 RSPH10B2B2RC85 870 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 KCNJ18B7U540 433 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 MYO1CO00159 1063 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 RSPH10BP0C881 870 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 HSD17B4P51659 736 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 MRPS9P82933 396 aaKnown RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 AMPD3Q01432 767 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 KCNJ12Q14500 433 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms