RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 MCMDC2Q4G0Z9 681 aa18.48■□□□□ 0.55
IFT20-202ENST00000357896 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
IFT20-202ENST00000357896 TICAM2Q86XR7 235 aa18.48■□□□□ 0.55
IFT20-202ENST00000357896 OTUD7AQ8TE49 926 aaPredicted RBP18.48■□□□□ 0.55
IFT20-202ENST00000357896 PBXIP1Q96AQ6 731 aa18.48■□□□□ 0.55
IFT20-202ENST00000357896 MLXIPQ9HAP2 919 aa18.48■□□□□ 0.55
IFT20-202ENST00000357896 MAP3K20Q9NYL2 800 aaKnown RBP18.48■□□□□ 0.55
IFT20-202ENST00000357896 RCAN3Q9UKA8 241 aa18.48■□□□□ 0.55
IFT20-202ENST00000357896 TREHO43280 583 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 DHX16O60231 1041 aaKnown RBP18.47■□□□□ 0.55
IFT20-202ENST00000357896 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 MYCLP12524 364 aaPredicted RBP18.47■□□□□ 0.55
IFT20-202ENST00000357896 HAND2P61296 217 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 DLX2Q07687 328 aaPredicted RBP18.47■□□□□ 0.55
IFT20-202ENST00000357896 ASPRV1Q53RT3 343 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 TRIM67Q6ZTA4 783 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 SUGP1Q8IWZ8 645 aaKnown RBP18.47■□□□□ 0.55
IFT20-202ENST00000357896 PNMA1Q8ND90 353 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 PPP2R3CQ969Q6 453 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 RNPEPQ9H4A4 650 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 CD207Q9UJ71 328 aa18.47■□□□□ 0.55
IFT20-202ENST00000357896 GRM6O15303 877 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 RGS20O76081 388 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 CTSHP09668 335 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 HSD17B4P51659 736 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 STOX1Q6ZVD7 989 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 VSIG10LQ86VR7 867 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 IQCA1Q86XH1 822 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 PRSS33Q8NF86 280 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 PHOX2BQ99453 314 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 PDCD2LQ9BRP1 358 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 USP26Q9BXU7 913 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 IGFLR1Q9H665 355 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 KAT14Q9H8E8 782 aa18.46■□□□□ 0.55
IFT20-202ENST00000357896 TMEM221A6NGB7 291 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 RBAK-RBAKDNI3L0D1 243 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 M0R296 226 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 SORBS3O60504 671 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 UBA1P22314 1058 aaKnown RBP18.45■□□□□ 0.54
IFT20-202ENST00000357896 SP2Q02086 613 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 GHRHRQ02643 423 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 SAMD3Q8N6K7 520 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 CLP1Q92989 425 aaKnown RBP18.45■□□□□ 0.54
IFT20-202ENST00000357896 ZKSCAN3Q9BRR0 538 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 PLVAPQ9BX97 442 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 AMNQ9BXJ7 453 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 JMJD4Q9H9V9 463 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 VAT1LQ9HCJ6 419 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 CCDC171Q6TFL3 1326 aa18.45■□□□□ 0.54
IFT20-202ENST00000357896 RALGAPA2Q2PPJ7 1873 aa18.44■□□□□ 0.54
IFT20-202ENST00000357896 NOP56O00567 594 aaKnown RBP18.44■□□□□ 0.54
IFT20-202ENST00000357896 PARP1P09874 1014 aaKnown RBP18.44■□□□□ 0.54
IFT20-202ENST00000357896 ADAM15Q13444 863 aa18.44■□□□□ 0.54
IFT20-202ENST00000357896 FAM26DQ5JW98 314 aa18.44■□□□□ 0.54
IFT20-202ENST00000357896 IER5LQ5T953 404 aa18.44■□□□□ 0.54
IFT20-202ENST00000357896 IRF2BPLQ9H1B7 796 aa18.44■□□□□ 0.54
IFT20-202ENST00000357896 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
IFT20-202ENST00000357896 ADGRA3Q8IWK6 1321 aa18.44■□□□□ 0.54
IFT20-202ENST00000357896 TBX10O75333 385 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 EYA4O95677 639 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 MMP1P03956 469 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 LGALS2P05162 132 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 NDUFV1P49821 464 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 PGM5Q15124 567 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 FAM227BQ96M60 508 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 OSBPL7Q9BZF2 842 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 SETD4Q9NVD3 440 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 NLRC5Q86WI3 1866 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 MYH7BA7E2Y1 1941 aa18.43■□□□□ 0.54
IFT20-202ENST00000357896 A0A0D9SFI3 127 aa18.42■□□□□ 0.54
IFT20-202ENST00000357896 LINC00271P0C7V0 271 aa18.42■□□□□ 0.54
IFT20-202ENST00000357896 CCND2P30279 289 aa18.42■□□□□ 0.54
IFT20-202ENST00000357896 ZXDAP98168 799 aa18.42■□□□□ 0.54
IFT20-202ENST00000357896 FOXK2Q01167 660 aa18.42■□□□□ 0.54
IFT20-202ENST00000357896 BTG3Q14201 252 aaPredicted RBP18.42■□□□□ 0.54
IFT20-202ENST00000357896 TBC1D10CQ8IV04 446 aa18.42■□□□□ 0.54
IFT20-202ENST00000357896 FBXL6Q8N531 539 aa18.42■□□□□ 0.54
IFT20-202ENST00000357896 ZNF215Q9UL58 517 aaPredicted RBP18.42■□□□□ 0.54
IFT20-202ENST00000357896 TECTAO75443 2155 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 TRIM6-TRIM34B2RNG4 842 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 ZNF213O14771 459 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 OPLAHO14841 1288 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 GTF2F1P35269 517 aaKnown RBP eCLIP18.41■□□□□ 0.54
IFT20-202ENST00000357896 MFAP1P55081 439 aaKnown RBP18.41■□□□□ 0.54
IFT20-202ENST00000357896 TCF15Q12870 199 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 TRAF1Q13077 416 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 GNPTABQ3T906 1256 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 NAALADL2Q58DX5 795 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 P2RX5Q93086 422 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 MSLNLQ96KJ4 702 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 ZSCAN10Q96SZ4 725 aaPredicted RBP18.41■□□□□ 0.54
IFT20-202ENST00000357896 PLAGL2Q9UPG8 496 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 PCDHA1Q9Y5I3 950 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 MYO7AQ13402 2215 aa18.41■□□□□ 0.54
IFT20-202ENST00000357896 LOC730098B7Z3J9 87 aa18.4■□□□□ 0.54
IFT20-202ENST00000357896 LINC01565O15544 149 aa18.4■□□□□ 0.54
IFT20-202ENST00000357896 GFRA3O60609 400 aa18.4■□□□□ 0.54
IFT20-202ENST00000357896 KDM4AO75164 1064 aa18.4■□□□□ 0.54
IFT20-202ENST00000357896 HOXA13P31271 388 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms