RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 SLF2Q8IX21 1173 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 PROCA1Q8NCQ7 364 aaPredicted RBP22.59■■□□□ 1.21
COL13A1-202ENST00000357811 AFAP1L1Q8TED9 768 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 EHD4Q9H223 541 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 GAKO14976 1311 aa22.58■■□□□ 1.21
COL13A1-202ENST00000357811 SHMT1P34896 483 aa22.58■■□□□ 1.21
COL13A1-202ENST00000357811 GABPAQ06546 454 aa22.58■■□□□ 1.21
COL13A1-202ENST00000357811 MED4Q9NPJ6 270 aa22.58■■□□□ 1.21
COL13A1-202ENST00000357811 PSD3Q9NYI0 1048 aa22.58■■□□□ 1.21
COL13A1-202ENST00000357811 ZC3H4Q9UPT8 1303 aaKnown RBP22.58■■□□□ 1.21
COL13A1-202ENST00000357811 NOL4O94818 638 aa22.58■■□□□ 1.2
COL13A1-202ENST00000357811 FGFR1OPO95684 399 aaKnown RBP22.58■■□□□ 1.2
COL13A1-202ENST00000357811 PLA2G4BP0C869 781 aa22.58■■□□□ 1.2
COL13A1-202ENST00000357811 CASP5P51878 434 aa22.58■■□□□ 1.2
COL13A1-202ENST00000357811 PSMC6P62333 389 aa22.58■■□□□ 1.2
COL13A1-202ENST00000357811 PDIA5Q14554 519 aa22.58■■□□□ 1.2
COL13A1-202ENST00000357811 TMEM119Q4V9L6 283 aa22.58■■□□□ 1.2
COL13A1-202ENST00000357811 HGSNATQ68CP4 663 aa22.58■■□□□ 1.2
COL13A1-202ENST00000357811 TLR10Q9BXR5 811 aa22.58■■□□□ 1.2
COL13A1-202ENST00000357811 BMP2KQ9NSY1 1161 aaPredicted RBP22.58■■□□□ 1.2
COL13A1-202ENST00000357811 ZNF219Q9P2Y4 722 aaPredicted RBP22.58■■□□□ 1.2
COL13A1-202ENST00000357811 PCDHA1Q9Y5I3 950 aa22.58■■□□□ 1.2
COL13A1-202ENST00000357811 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.58■■□□□ 1.2
COL13A1-202ENST00000357811 GOLGA6BA6NDN3 693 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 G3V3G9 751 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 EPS15P42566 896 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 MRPL12P52815 198 aaKnown RBP22.57■■□□□ 1.2
COL13A1-202ENST00000357811 CDK17Q00537 523 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 CYP4A11Q02928 519 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 DDR1Q08345 913 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 IKQ13123 557 aaPredicted RBP22.57■■□□□ 1.2
COL13A1-202ENST00000357811 PABPC4Q13310 644 aaKnown RBP eCLIP22.57■■□□□ 1.2
COL13A1-202ENST00000357811 DCAF8Q5TAQ9 597 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 CCDC70Q6NSX1 233 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 TULP1O00294 542 aaPredicted RBP22.57■■□□□ 1.2
COL13A1-202ENST00000357811 PRR16Q569H4 304 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 MUM1L1Q5H9M0 696 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 SAMD1Q6SPF0 538 aaPredicted RBP22.57■■□□□ 1.2
COL13A1-202ENST00000357811 LRRC31Q6UY01 552 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 ZNF662Q6ZS27 426 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 IFT81Q8WYA0 676 aa22.57■■□□□ 1.2
COL13A1-202ENST00000357811 PALMO75781 387 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 HNRNPH3P31942 346 aaKnown RBP22.56■■□□□ 1.2
COL13A1-202ENST00000357811 SFMBT2Q5VUG0 894 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 FNBP4Q8N3X1 1017 aaPredicted RBP22.56■■□□□ 1.2
COL13A1-202ENST00000357811 TBC1D22AQ8WUA7 517 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 RPGRIP1Q96KN7 1286 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 HYOU1Q9Y4L1 999 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 BTAF1O14981 1849 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 ZBTB5O15062 677 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 MED24O75448 989 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 KLRC1P26715 233 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 RBM5P52756 815 aaKnown RBP eCLIP22.56■■□□□ 1.2
COL13A1-202ENST00000357811 ADAM9Q13443 819 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 QRICH1Q2TAL8 776 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 CRY2Q49AN0 593 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 KLHDC7AQ5VTJ3 777 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 ZC3H12CQ9C0D7 883 aaKnown RBP22.56■■□□□ 1.2
COL13A1-202ENST00000357811 IKZF4Q9H2S9 585 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 A0A087X0T9 212 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 TARSL2A2RTX5 802 aaKnown RBP22.56■■□□□ 1.2
COL13A1-202ENST00000357811 PRPF6O94906 941 aaKnown RBP22.56■■□□□ 1.2
COL13A1-202ENST00000357811 FAM228BP0C875 321 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 EHHADHQ08426 723 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 SCFD1Q8WVM8 642 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 FAM163AQ96GL9 167 aaPredicted RBP22.56■■□□□ 1.2
COL13A1-202ENST00000357811 NOX5Q96PH1 765 aa22.56■■□□□ 1.2
COL13A1-202ENST00000357811 MYO1CO00159 1063 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 MCM3P25205 808 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 SLC9C1Q4G0N8 1177 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 IQCEQ6IPM2 695 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 CDC42EP5Q6NZY7 148 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 KIAA0825Q8IV33 1275 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 CWC15Q9P013 229 aaKnown RBP22.55■■□□□ 1.2
COL13A1-202ENST00000357811 SNHG28P0DPA3 235 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 SMARCA1P28370 1054 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 PAFAH1B1P43034 410 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 SEMA3FQ13275 785 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 TRADDQ15628 312 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 C15orf52Q6ZUT6 534 aaKnown RBP22.55■■□□□ 1.2
COL13A1-202ENST00000357811 TSEN2Q8NCE0 465 aaKnown RBP22.55■■□□□ 1.2
COL13A1-202ENST00000357811 DBNDD1Q9H9R9 158 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 EMILIN3Q9NT22 766 aa22.55■■□□□ 1.2
COL13A1-202ENST00000357811 RRP15Q9Y3B9 282 aaKnown RBP22.55■■□□□ 1.2
COL13A1-202ENST00000357811 CDK5RAP2Q96SN8 1893 aa22.54■■□□□ 1.2
COL13A1-202ENST00000357811 RGL2O15211 777 aa22.54■■□□□ 1.2
COL13A1-202ENST00000357811 KIAA0753Q2KHM9 967 aa22.54■■□□□ 1.2
COL13A1-202ENST00000357811 P2RX7Q99572 595 aaKnown RBP22.54■■□□□ 1.2
COL13A1-202ENST00000357811 SFI1A8K8P3 1242 aa22.54■■□□□ 1.2
COL13A1-202ENST00000357811 TULP2O00295 520 aa22.54■■□□□ 1.2
COL13A1-202ENST00000357811 ZCWPW2Q504Y3 356 aa22.54■■□□□ 1.2
COL13A1-202ENST00000357811 HAUS3Q68CZ6 603 aa22.54■■□□□ 1.2
COL13A1-202ENST00000357811 PPP4R3AQ6IN85 833 aa22.54■■□□□ 1.2
COL13A1-202ENST00000357811 C8orf74Q6P047 294 aa22.54■■□□□ 1.2
COL13A1-202ENST00000357811 FEZ2Q9UHY8 353 aaPredicted RBP22.54■■□□□ 1.2
COL13A1-202ENST00000357811 BBOX1O75936 387 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 ASTE1Q2TB18 679 aaPredicted RBP22.53■■□□□ 1.2
COL13A1-202ENST00000357811 DCAF17Q5H9S7 520 aaPredicted RBP22.53■■□□□ 1.2
COL13A1-202ENST00000357811 TCERG1LQ5VWI1 586 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms