RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 HINFPQ9BQA5 517 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 VCPKMTQ9H867 229 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 SEC63Q9UGP8 760 aaKnown RBP12.56□□□□□ -0.4
CAPN9-202ENST00000354537 BAG3O95817 575 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 PRDX5P30044 214 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 NOVP48745 357 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 ATP1A2P50993 1020 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 MTMR3Q13615 1198 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 SPDYCQ5MJ68 293 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 FBXW10Q5XX13 1052 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 KCTD16Q68DU8 428 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
CAPN9-202ENST00000354537 P3H4Q92791 437 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 HPS3Q969F9 1004 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 DOT1LQ8TEK3 1739 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 LOC102724428A0A0B4J2F2 783 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 USP17L3A6NCW0 530 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 USP17L4A6NCW7 530 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 H0YHG0 523 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 CCDC188H7C350 402 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 KLRC1P26715 233 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 TXKP42681 527 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 SIK1P57059 783 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 RPS8P62241 208 aaKnown RBP12.55□□□□□ -0.4
CAPN9-202ENST00000354537 RPS6KA1Q15418 735 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 TTC19Q6DKK2 380 aaPredicted RBP12.55□□□□□ -0.4
CAPN9-202ENST00000354537 USP17L1Q7RTZ2 530 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 TRIM59Q8IWR1 403 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 NEDD1Q8NHV4 660 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 WDR66Q8TBY9 1149 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 DDX12PQ92771 950 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 PLAAQ9Y263 795 aa12.55□□□□□ -0.4
CAPN9-202ENST00000354537 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
CAPN9-202ENST00000354537 WTIPA6NIX2 430 aaPredicted RBP12.54□□□□□ -0.4
CAPN9-202ENST00000354537 GCOM1H8Y6P7 765 aaPredicted RBP12.54□□□□□ -0.4
CAPN9-202ENST00000354537 LDHCP07864 332 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 PAEPP09466 180 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 MYZAPP0CAP1 466 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 RASA1P20936 1047 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 USP11P51784 963 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 MRPS25P82663 173 aaKnown RBP12.54□□□□□ -0.4
CAPN9-202ENST00000354537 GUCY1A3Q02108 690 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 CCDC40Q4G0X9 1142 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 HYIQ5T013 277 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 LSM14BQ9BX40 385 aaKnown RBP12.54□□□□□ -0.4
CAPN9-202ENST00000354537 TANGO6Q9C0B7 1094 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 RIOX1Q9H6W3 641 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 BMP2KQ9NSY1 1161 aaPredicted RBP12.54□□□□□ -0.4
CAPN9-202ENST00000354537 ATAD5Q96QE3 1844 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 H0YGN5 161 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 CHUKO15111 745 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 RAD51CO43502 376 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 ASIC2Q16515 512 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 PPP1R18Q6NYC8 613 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 CELF1Q92879 486 aaKnown RBP12.54□□□□□ -0.4
CAPN9-202ENST00000354537 DNAJC19Q96DA6 116 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 DYNLL2Q96FJ2 89 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 NFS1Q9Y697 457 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 IRS2Q9Y4H2 1338 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 WNK3Q9BYP7 1800 aa12.54□□□□□ -0.4
CAPN9-202ENST00000354537 GMNCA6NCL1 334 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 C5orf60A6NFR6 353 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 KLHL30Q0D2K2 578 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 KIAA0753Q2KHM9 967 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 CEP85LQ5SZL2 805 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 C3orf67Q6ZVT6 689 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 CCDC50Q8IVM0 306 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 LMBR1Q8WVP7 490 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 NAP1L4Q99733 375 aaKnown RBP12.53□□□□□ -0.4
CAPN9-202ENST00000354537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
CAPN9-202ENST00000354537 TRAF5O00463 557 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 RASSF9O75901 435 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 KIF4AO95239 1232 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 FTCDO95954 541 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 POLR2FP61218 127 aaKnown RBP12.53□□□□□ -0.4
CAPN9-202ENST00000354537 COASYQ13057 564 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 ITPK1Q13572 414 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 EDRF1Q3B7T1 1238 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 FAM26FQ5R3K3 315 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 DYMQ7RTS9 669 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 MAATS1Q7Z4T9 603 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 MAGEC3Q8TD91 643 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 SNX29Q8TEQ0 813 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 NT5C3AQ9H0P0 336 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 GANQ9H2C0 597 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 SLITRK6Q9H5Y7 841 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 NLRC4Q9NPP4 1024 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 INTUQ9ULD6 942 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
CAPN9-202ENST00000354537 MYH10P35580 1976 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 A0A087X0T9 212 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 A0A0A6YYK5 440 aaPredicted RBP12.52□□□□□ -0.4
CAPN9-202ENST00000354537 GOLGA6L7A0A1B0GV03 622 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.4
CAPN9-202ENST00000354537 FAM228BP0C875 321 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms