RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PLEKHA8P1O95397 391 aa18.35■□□□□ 0.53
PDGFA-201ENST00000354513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.35■□□□□ 0.53
PDGFA-201ENST00000354513 GDPD5Q8WTR4 605 aa18.35■□□□□ 0.53
PDGFA-201ENST00000354513 SPATA31C2B4DYI2 1134 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 KIF28PB7ZC32 967 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 H3BRB1 525 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 MEIS2O14770 477 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 LGR5O75473 907 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 SMIM10L2AP0DMW4 78 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 SMIM10L2BP0DMW5 78 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 USP17L6PQ6QN14 398 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 CATIPQ7Z7H3 387 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 TRIM50Q86XT4 487 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 MAP3K14Q99558 947 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 GPR20Q99678 358 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 LSG1Q9H089 658 aaKnown RBP18.34■□□□□ 0.53
PDGFA-201ENST00000354513 TUT1Q9H6E5 874 aaKnown RBP18.34■□□□□ 0.53
PDGFA-201ENST00000354513 MLXIPQ9HAP2 919 aa18.34■□□□□ 0.53
PDGFA-201ENST00000354513 LINC01553A4QN01 128 aa18.33■□□□□ 0.53
PDGFA-201ENST00000354513 TREHO43280 583 aa18.33■□□□□ 0.53
PDGFA-201ENST00000354513 GTPBP6O43824 516 aaPredicted RBP18.33■□□□□ 0.53
PDGFA-201ENST00000354513 DDAH1O94760 285 aa18.33■□□□□ 0.53
PDGFA-201ENST00000354513 TRAF1Q13077 416 aa18.33■□□□□ 0.53
PDGFA-201ENST00000354513 SART3Q15020 963 aaKnown RBP18.33■□□□□ 0.53
PDGFA-201ENST00000354513 SRBD1Q8N5C6 995 aaKnown RBP18.33■□□□□ 0.53
PDGFA-201ENST00000354513 RNPEPQ9H4A4 650 aa18.33■□□□□ 0.53
PDGFA-201ENST00000354513 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.53
PDGFA-201ENST00000354513 C17orf102A2RUQ5 167 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 SH2B2O14492 632 aaPredicted RBP18.32■□□□□ 0.52
PDGFA-201ENST00000354513 PRC1O43663 620 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 ERVK-21P61565 698 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 ADAM17P78536 824 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 PLEKHG4Q58EX7 1191 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 METTL7BQ6UX53 244 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 CYFIP1Q7L576 1253 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 CMTR1Q8N1G2 835 aaKnown RBP18.32■□□□□ 0.52
PDGFA-201ENST00000354513 DBF4BQ8NFT6 615 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 RAD9AQ99638 391 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 SUGCTQ9HAC7 445 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 BRWD1Q9NSI6 2320 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 WDR81Q562E7 1941 aa18.32■□□□□ 0.52
PDGFA-201ENST00000354513 NCOR1O75376 2440 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 RSPH10B2B2RC85 870 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 FIBPO43427 364 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 STAM2O75886 525 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 RSPH10BP0C881 870 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 RXRAP19793 462 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 THPOP40225 353 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 IKBKEQ14164 716 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 GNPTABQ3T906 1256 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 PCNX4Q63HM2 1172 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 FAM117BQ6P1L5 589 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 ATP6V0A1Q93050 837 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 TSPYL2Q9H2G4 693 aaPredicted RBP18.31■□□□□ 0.52
PDGFA-201ENST00000354513 EMSYQ7Z589 1322 aa18.31■□□□□ 0.52
PDGFA-201ENST00000354513 SLC27A2O14975 620 aa18.3■□□□□ 0.52
PDGFA-201ENST00000354513 EFCAB14O75071 495 aa18.3■□□□□ 0.52
PDGFA-201ENST00000354513 SMARCA1P28370 1054 aa18.3■□□□□ 0.52
PDGFA-201ENST00000354513 HTRA4P83105 476 aaPredicted RBP18.3■□□□□ 0.52
PDGFA-201ENST00000354513 SKIV2LQ15477 1246 aaKnown RBP18.3■□□□□ 0.52
PDGFA-201ENST00000354513 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
PDGFA-201ENST00000354513 SP7Q8TDD2 431 aaPredicted RBP18.3■□□□□ 0.52
PDGFA-201ENST00000354513 MTA3Q9BTC8 594 aa18.3■□□□□ 0.52
PDGFA-201ENST00000354513 ZBED2Q9BTP6 218 aa18.3■□□□□ 0.52
PDGFA-201ENST00000354513 SETD4Q9NVD3 440 aa18.3■□□□□ 0.52
PDGFA-201ENST00000354513 MTUS1Q9ULD2 1270 aa18.3■□□□□ 0.52
PDGFA-201ENST00000354513 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.29■□□□□ 0.52
PDGFA-201ENST00000354513 ATP9AO75110 1047 aa18.29■□□□□ 0.52
PDGFA-201ENST00000354513 CTSHP09668 335 aa18.29■□□□□ 0.52
PDGFA-201ENST00000354513 NEDD9Q14511 834 aa18.29■□□□□ 0.52
PDGFA-201ENST00000354513 CTCFLQ8NI51 663 aaPredicted RBP18.29■□□□□ 0.52
PDGFA-201ENST00000354513 LMBR1Q8WVP7 490 aa18.29■□□□□ 0.52
PDGFA-201ENST00000354513 RRP36Q96EU6 259 aaKnown RBP18.29■□□□□ 0.52
PDGFA-201ENST00000354513 C17orf80Q9BSJ5 609 aa18.29■□□□□ 0.52
PDGFA-201ENST00000354513 ESYT1Q9BSJ8 1104 aa18.29■□□□□ 0.52
PDGFA-201ENST00000354513 RAPGEFL1Q9UHV5 662 aa18.29■□□□□ 0.52
PDGFA-201ENST00000354513 NOP56O00567 594 aaKnown RBP18.28■□□□□ 0.52
PDGFA-201ENST00000354513 KCNA2P16389 499 aa18.28■□□□□ 0.52
PDGFA-201ENST00000354513 NECTIN1Q15223 517 aa18.28■□□□□ 0.52
PDGFA-201ENST00000354513 UBE2SQ16763 222 aa18.28■□□□□ 0.52
PDGFA-201ENST00000354513 SKAP1Q86WV1 359 aa18.28■□□□□ 0.52
PDGFA-201ENST00000354513 SMARCC2Q8TAQ2 1214 aa18.28■□□□□ 0.52
PDGFA-201ENST00000354513 TGS1Q96RS0 853 aaKnown RBP18.28■□□□□ 0.52
PDGFA-201ENST00000354513 SENP7Q9BQF6 1050 aa18.28■□□□□ 0.52
PDGFA-201ENST00000354513 USP26Q9BXU7 913 aa18.28■□□□□ 0.52
PDGFA-201ENST00000354513 COG5Q9UP83 839 aa18.28■□□□□ 0.52
PDGFA-201ENST00000354513 hCG_1642624A0A1W2PR95 340 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 ITGB5P18084 799 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 KIF5BP33176 963 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 SP4Q02446 784 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 FAM26DQ5JW98 314 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 UTP14CQ5TAP6 766 aaKnown RBP18.27■□□□□ 0.52
PDGFA-201ENST00000354513 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 CASC1Q6TDU7 716 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 MYOCDQ8IZQ8 938 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 TMEM87BQ96K49 555 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 LRRC2Q9BYS8 371 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 LMCD1Q9NZU5 365 aa18.27■□□□□ 0.52
PDGFA-201ENST00000354513 GSTTP1A0A1W2PQM5 241 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms