RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 TMTC1Q8IUR5 882 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 CDKL2Q92772 493 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 WDR64B1ANS9 1081 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 NME3Q13232 169 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.81□□□□□ -0.68
COL11A1-201ENST00000353414 HAUS8Q9BT25 410 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 SART1O43290 800 aaKnown RBP10.81□□□□□ -0.68
COL11A1-201ENST00000353414 NDUFA8P51970 172 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 MAIP1Q8WWC4 291 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 MAGOHBQ96A72 148 aaKnown RBP10.81□□□□□ -0.68
COL11A1-201ENST00000353414 VCX3AQ9NNX9 186 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 KLHL14Q9P2G3 628 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 CEP170Q5SW79 1584 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 ZBTB7BO15156 539 aaPredicted RBP10.81□□□□□ -0.68
COL11A1-201ENST00000353414 ARHGAP6O43182 974 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 PRKAB2O43741 272 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 SYCP2LQ5T4T6 812 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 NCLNQ969V3 563 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 CNOT6LQ96LI5 555 aaKnown RBP10.81□□□□□ -0.68
COL11A1-201ENST00000353414 RPF1Q9H9Y2 349 aaKnown RBP10.81□□□□□ -0.68
COL11A1-201ENST00000353414 CCDC195A0A1B0GUA6 201 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 SCG2P13521 617 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 CCDC85BQ15834 202 aaPredicted RBP10.81□□□□□ -0.68
COL11A1-201ENST00000353414 WHAMMP3Q1A5X7 153 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 FAM133BQ5BKY9 247 aaKnown RBP10.81□□□□□ -0.68
COL11A1-201ENST00000353414 ERLEC1Q96DZ1 483 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 CCDC138Q96M89 665 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 CARD14Q9BXL6 1004 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 SLC7A5Q01650 507 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 FAM133AQ8N9E0 248 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 PIGSQ96S52 555 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 ABCC2Q92887 1545 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 DDAH1O94760 285 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 IRF1P10914 325 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 ARHGDIAP52565 204 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 SUPT20HL1Q3ZLR7 823 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL11A1-201ENST00000353414 PIGOQ8TEQ8 1089 aa10.81□□□□□ -0.68
COL11A1-201ENST00000353414 STX1BP61266 288 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 PPP6R3Q5H9R7 873 aaPredicted RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 PPHLN1Q8NEY8 458 aaKnown RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 MAML1Q92585 1016 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 ZFYVE19Q96K21 471 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 USP28Q96RU2 1077 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 PRAMEF22A3QJZ6 481 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 MCF2LO15068 1137 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 MFAP3P55082 362 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 SEPT12Q8IYM1 358 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 FBXL13Q8NEE6 735 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 ZNF215Q9UL58 517 aaPredicted RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 HLA-DPA1P20036 260 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 TWF2Q6IBS0 349 aaKnown RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 C11orf74Q86VG3 221 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 SCYL3Q8IZE3 742 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 RAPGEF5Q92565 580 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 FGAP02671 866 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 PLS3P13797 630 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 AOC3Q16853 763 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 THNSL1Q8IYQ7 743 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 IWS1Q96ST2 819 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 FANCLQ9NW38 375 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 SLC4A7Q9Y6M7 1214 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 SYF2O95926 243 aaKnown RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 FTCDO95954 541 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 HSPD1P10809 573 aaKnown RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 NR2F2P24468 414 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 IREB2P48200 963 aaKnown RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 HDLBPQ00341 1268 aaKnown RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 FANCBQ8NB91 859 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 NT5C1BQ96P26 610 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 TTC1Q99614 292 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 TRIM4Q9C037 500 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 CAPN10Q9HC96 672 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 RAVER2Q9HCJ3 691 aaKnown RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 COL4A3BPQ9Y5P4 624 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 LOC102724428A0A0B4J2F2 783 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 TTLL1O95922 423 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 MOCS2O96007 188 aaPredicted RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 SIK1P57059 783 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 MTMR3Q13615 1198 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 SGO2Q562F6 1265 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 TCP11X2Q5H9J9 407 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 PCGF5Q86SE9 256 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 ERO1AQ96HE7 468 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 CYTH2Q99418 400 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 LLPHQ9BRT6 129 aaKnown RBP10.8□□□□□ -0.68
COL11A1-201ENST00000353414 RAD18Q9NS91 495 aa10.8□□□□□ -0.68
COL11A1-201ENST00000353414 PRR23AA6NEV1 266 aa10.79□□□□□ -0.68
COL11A1-201ENST00000353414 MYO1FO00160 1098 aa10.79□□□□□ -0.68
COL11A1-201ENST00000353414 ARL4AP40617 200 aa10.79□□□□□ -0.68
COL11A1-201ENST00000353414 OCRLQ01968 901 aa10.79□□□□□ -0.68
COL11A1-201ENST00000353414 ART3Q13508 389 aa10.79□□□□□ -0.68
COL11A1-201ENST00000353414 C2orf69Q8N8R5 385 aa10.79□□□□□ -0.68
COL11A1-201ENST00000353414 CACTINQ8WUQ7 758 aaKnown RBP10.79□□□□□ -0.68
COL11A1-201ENST00000353414 IFT43Q96FT9 208 aa10.79□□□□□ -0.68
COL11A1-201ENST00000353414 AP1M1Q9BXS5 423 aa10.79□□□□□ -0.68
COL11A1-201ENST00000353414 ZSCAN9O15535 394 aaPredicted RBP10.79□□□□□ -0.68
COL11A1-201ENST00000353414 SNX21Q969T3 373 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms