RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 AS3MTQ9HBK9 375 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 TUFT1Q9NNX1 390 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 TAB2Q9NYJ8 693 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 GGA3Q9NZ52 723 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 COL20A1Q9P218 1284 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 CCPG1Q9ULG6 757 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 R3HCC1Q9Y3T6 440 aaKnown RBP7.72□□□□□ -1.17
TRIM55-203ENST00000350034 POTEFA5A3E0 1075 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 AKR1B15C9JRZ8 316 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 NFIBO00712 420 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 N4BP3O15049 544 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 ARHGAP6O43182 974 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 NRDCO43847 1150 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 STX10O60499 249 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 EYA4O95677 639 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 TPM2P07951 284 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 POTEIP0CG38 1075 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 YBX3P16989 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 ZNF76P36508 570 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 OAZ1P54368 228 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 SETQ01105 290 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 DGKZQ13574 1117 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 PTPN21Q16825 1174 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 ARSHQ5FYA8 562 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 SH3D19Q5HYK7 790 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 NCAPH2Q6IBW4 605 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 POTEGQ6S5H5 508 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 POTEEQ6S8J3 1075 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 DYMQ7RTS9 669 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 GPBP1Q86WP2 473 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 FAM114A1Q8IWE2 563 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 CCDC65Q8IXS2 484 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 ZC3H3Q8IXZ2 948 aaKnown RBP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 CSGALNACT2Q8N6G5 542 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 MB21D1Q8N884 522 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 SYTL5Q8TDW5 730 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 HPS3Q969F9 1004 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 CCDC51Q96ER9 411 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 TRIM47Q96LD4 638 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 WRNIP1Q96S55 665 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 RIT2Q99578 217 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 EIF2AK1Q9BQI3 630 aaKnown RBP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 MXRA8Q9BRK3 442 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 MAF1Q9H063 256 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 RPAP3Q9H6T3 665 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 SLC39A2Q9NP94 309 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 BMP2KQ9NSY1 1161 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 PANK4Q9NVE7 773 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.71□□□□□ -1.18
TRIM55-203ENST00000350034 UBIAD1Q9Y5Z9 338 aa7.71□□□□□ -1.18
TRIM55-203ENST00000350034 VWA5AO00534 786 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 ATP2A1O14983 1001 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 MFAP3LO75121 409 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 ZBED4O75132 1171 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 USP2O75604 605 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-203ENST00000350034 FLOT1O75955 427 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 SLITRK3O94933 977 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 TUBB4AP04350 444 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 GYPCP04921 128 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 ARP10275 920 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 TNNT1P13805 278 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 IDEP14735 1019 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 ITGB5P18084 799 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 DNM2P50570 870 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 ADKP55263 362 aaKnown RBP7.7□□□□□ -1.18
TRIM55-203ENST00000350034 PSMC6P62333 389 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 LRRC63Q05C16 580 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 RBL2Q08999 1139 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 GOLGA8FQ08AF8 430 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 GOLGA8DPQ0D2H9 430 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 TRIM14Q14142 442 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 GIT2Q14161 759 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 EPHA7Q15375 998 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 SUPT20HL1Q3ZLR7 823 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 MUM1L1Q5H9M0 696 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 FAM26FQ5R3K3 315 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 LRCH2Q5VUJ6 765 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 PRAMEF18Q5VWM3 479 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 PCNX4Q63HM2 1172 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 CEP135Q66GS9 1140 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 LRRC55Q6ZSA7 311 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 KRT26Q7Z3Y9 468 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 MYOCDQ8IZQ8 938 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 RBM46Q8TBY0 533 aaKnown RBP7.7□□□□□ -1.18
TRIM55-203ENST00000350034 ZKSCAN4Q969J2 545 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-203ENST00000350034 ATG4CQ96DT6 458 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 PPP1R13BQ96KQ4 1090 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 UIMC1Q96RL1 719 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 BAG1Q99933 345 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-203ENST00000350034 NAA15Q9BXJ9 866 aaKnown RBP7.7□□□□□ -1.18
TRIM55-203ENST00000350034 WDR11Q9BZH6 1224 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 TANGO6Q9C0B7 1094 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 VPS16Q9H269 839 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 RAVER2Q9HCJ3 691 aaKnown RBP7.7□□□□□ -1.18
TRIM55-203ENST00000350034 PICK1Q9NRD5 415 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 MAGEC2Q9UBF1 373 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-203ENST00000350034 DNM3Q9UQ16 869 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 AFG3L2Q9Y4W6 797 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 MYPNQ86TC9 1320 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms