RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 SMIM10L2AP0DMW4 78 aa21.52■■□□□ 1.04
KDM5C-201ENST00000349663 SMIM10L2BP0DMW5 78 aa21.52■■□□□ 1.04
KDM5C-201ENST00000349663 HOXA13P31271 388 aaPredicted RBP21.52■■□□□ 1.04
KDM5C-201ENST00000349663 HOXC8P31273 242 aa21.52■■□□□ 1.04
KDM5C-201ENST00000349663 HDAC1Q13547 482 aaPredicted RBP21.52■■□□□ 1.04
KDM5C-201ENST00000349663 STAG2Q8N3U4 1231 aa21.52■■□□□ 1.04
KDM5C-201ENST00000349663 UBAC1Q9BSL1 405 aa21.52■■□□□ 1.04
KDM5C-201ENST00000349663 RNPEPQ9H4A4 650 aa21.52■■□□□ 1.04
KDM5C-201ENST00000349663 NSUN3Q9H649 340 aaKnown RBP21.52■■□□□ 1.04
KDM5C-201ENST00000349663 POTEB3A0JP26 581 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 KLRF2D3W0D1 207 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 ZBTB5O15062 677 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 PPP1R11O60927 126 aaPredicted RBP21.51■■□□□ 1.03
KDM5C-201ENST00000349663 CCND2P30279 289 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 COL19A1Q14993 1142 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 POTEBQ6S5H4 581 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 IL31RAQ8NI17 732 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 MTMR8Q96EF0 704 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 KRT23Q9C075 422 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 PRKAG3Q9UGI9 489 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 MICAL3Q7RTP6 2002 aa21.51■■□□□ 1.03
KDM5C-201ENST00000349663 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.5■■□□□ 1.03
KDM5C-201ENST00000349663 LGALS2P05162 132 aa21.5■■□□□ 1.03
KDM5C-201ENST00000349663 CTSHP09668 335 aa21.5■■□□□ 1.03
KDM5C-201ENST00000349663 GNAT1P11488 350 aa21.5■■□□□ 1.03
KDM5C-201ENST00000349663 ZP2Q05996 745 aa21.5■■□□□ 1.03
KDM5C-201ENST00000349663 IMMTQ16891 758 aaKnown RBP21.5■■□□□ 1.03
KDM5C-201ENST00000349663 IFIT1BQ5T764 474 aaKnown RBP21.5■■□□□ 1.03
KDM5C-201ENST00000349663 CWC27Q6UX04 472 aaKnown RBP21.5■■□□□ 1.03
KDM5C-201ENST00000349663 GPKOWQ92917 476 aaPredicted RBP eCLIP21.5■■□□□ 1.03
KDM5C-201ENST00000349663 ZFP91Q96JP5 570 aaPredicted RBP21.5■■□□□ 1.03
KDM5C-201ENST00000349663 USP26Q9BXU7 913 aa21.5■■□□□ 1.03
KDM5C-201ENST00000349663 IFIH1Q9BYX4 1025 aaKnown RBP21.5■■□□□ 1.03
KDM5C-201ENST00000349663 OSBPL7Q9BZF2 842 aa21.5■■□□□ 1.03
KDM5C-201ENST00000349663 LNPKQ9C0E8 428 aa21.5■■□□□ 1.03
KDM5C-201ENST00000349663 GCOM1H8Y6P7 765 aaPredicted RBP21.49■■□□□ 1.03
KDM5C-201ENST00000349663 NOP56O00567 594 aaKnown RBP21.49■■□□□ 1.03
KDM5C-201ENST00000349663 NCK2O43639 380 aa21.49■■□□□ 1.03
KDM5C-201ENST00000349663 POLR2MP0CAP2 368 aa21.49■■□□□ 1.03
KDM5C-201ENST00000349663 TRAF1Q13077 416 aa21.49■■□□□ 1.03
KDM5C-201ENST00000349663 APBB2Q92870 758 aa21.49■■□□□ 1.03
KDM5C-201ENST00000349663 BCAS3Q9H6U6 928 aa21.49■■□□□ 1.03
KDM5C-201ENST00000349663 CNNM2Q9H8M5 875 aa21.49■■□□□ 1.03
KDM5C-201ENST00000349663 CLDND1Q9NY35 253 aa21.49■■□□□ 1.03
KDM5C-201ENST00000349663 MYH6P13533 1939 aa21.49■■□□□ 1.03
KDM5C-201ENST00000349663 C19orf67A6NJJ6 358 aa21.48■■□□□ 1.03
KDM5C-201ENST00000349663 FCHSD1Q86WN1 690 aa21.48■■□□□ 1.03
KDM5C-201ENST00000349663 ADHFE1Q8IWW8 467 aa21.48■■□□□ 1.03
KDM5C-201ENST00000349663 IL17RAQ96F46 866 aa21.48■■□□□ 1.03
KDM5C-201ENST00000349663 DIAPH3Q9NSV4 1193 aa21.48■■□□□ 1.03
KDM5C-201ENST00000349663 SETD4Q9NVD3 440 aa21.48■■□□□ 1.03
KDM5C-201ENST00000349663 MAD2L2Q9UI95 211 aa21.48■■□□□ 1.03
KDM5C-201ENST00000349663 PALM3A6NDB9 673 aaPredicted RBP21.47■■□□□ 1.03
KDM5C-201ENST00000349663 GNPTABQ3T906 1256 aa21.47■■□□□ 1.03
KDM5C-201ENST00000349663 FIBCD1Q8N539 461 aa21.47■■□□□ 1.03
KDM5C-201ENST00000349663 DSCC1Q9BVC3 393 aa21.47■■□□□ 1.03
KDM5C-201ENST00000349663 UPF3BQ9BZI7 483 aaKnown RBP21.47■■□□□ 1.03
KDM5C-201ENST00000349663 KCNH6Q9H252 994 aa21.47■■□□□ 1.03
KDM5C-201ENST00000349663 RB1P06400 928 aa21.46■■□□□ 1.03
KDM5C-201ENST00000349663 MRE11P49959 708 aa21.46■■□□□ 1.03
KDM5C-201ENST00000349663 NEDD9Q14511 834 aa21.46■■□□□ 1.03
KDM5C-201ENST00000349663 METTL7BQ6UX53 244 aa21.46■■□□□ 1.03
KDM5C-201ENST00000349663 HOMER1Q86YM7 354 aa21.46■■□□□ 1.03
KDM5C-201ENST00000349663 MYO7AQ13402 2215 aa21.45■■□□□ 1.03
KDM5C-201ENST00000349663 C5orf67F2Z3F1 127 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 ICAM3P32942 547 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 CTNNB1P35222 781 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 LTBRP36941 435 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 SEC23AQ15436 765 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 FAM26DQ5JW98 314 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 CYFIP1Q7L576 1253 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 RPAINQ86UA6 219 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 FBXL18Q96ME1 805 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 GPR20Q99678 358 aa21.45■■□□□ 1.02
KDM5C-201ENST00000349663 ZNF215Q9UL58 517 aaPredicted RBP21.45■■□□□ 1.02
KDM5C-201ENST00000349663 COL4A6Q14031 1691 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 SPATA31C2B4DYI2 1134 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 HIP1O00291 1037 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 STAM2O75886 525 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 BMPR1AP36894 532 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 RRP1P56182 461 aaKnown RBP21.44■■□□□ 1.02
KDM5C-201ENST00000349663 MRPS9P82933 396 aaKnown RBP21.44■■□□□ 1.02
KDM5C-201ENST00000349663 NHLH1Q02575 133 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 CTC1Q2NKJ3 1217 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 INPP4AQ96PE3 977 aaPredicted RBP21.44■■□□□ 1.02
KDM5C-201ENST00000349663 PIGSQ96S52 555 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 C11orf84Q9BUA3 381 aaPredicted RBP21.44■■□□□ 1.02
KDM5C-201ENST00000349663 LMAN2LQ9H0V9 348 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 RIOX1Q9H6W3 641 aa21.44■■□□□ 1.02
KDM5C-201ENST00000349663 IRS1P35568 1242 aa21.43■■□□□ 1.02
KDM5C-201ENST00000349663 ADAM17P78536 824 aa21.43■■□□□ 1.02
KDM5C-201ENST00000349663 ARHGAP4P98171 946 aa21.43■■□□□ 1.02
KDM5C-201ENST00000349663 B4GALNT3Q6L9W6 998 aa21.43■■□□□ 1.02
KDM5C-201ENST00000349663 PLEKHM2Q8IWE5 1019 aa21.43■■□□□ 1.02
KDM5C-201ENST00000349663 OSBPL3Q9H4L5 887 aa21.43■■□□□ 1.02
KDM5C-201ENST00000349663 RTEL1Q9NZ71 1219 aa21.43■■□□□ 1.02
KDM5C-201ENST00000349663 RWDD3Q9Y3V2 267 aa21.43■■□□□ 1.02
KDM5C-201ENST00000349663 PNMA6FA0A0J9YX94 578 aa21.42■■□□□ 1.02
KDM5C-201ENST00000349663 GRM6O15303 877 aa21.42■■□□□ 1.02
KDM5C-201ENST00000349663 FIBPO43427 364 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms