RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 EML1O00423 815 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 UBE2HP62256 183 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 TRIM32Q13049 653 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 LY6KQ17RY6 165 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 RESP18Q5W5W9 173 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 CCDC62Q6P9F0 684 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 B3GNT9Q6UX72 402 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 OTOP1Q7RTM1 612 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 ZNF579Q8NAF0 562 aaKnown RBP21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 UNC45AQ9H3U1 944 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 VTA1Q9NP79 307 aa21.44■■□□□ 1.02
CHMP4A-201ENST00000347519 A0A1W2PQ27 194 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 A0A1W2PQ64 194 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 A0A1W2PQD8 194 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 DDX11L8A8MPP1 907 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 MAFGO15525 162 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 GAS7O60861 476 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 LIG1P18858 919 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 UBA1P22314 1058 aaKnown RBP21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 LONP1P36776 959 aaKnown RBP21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 ACVR2BQ13705 512 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 FSIP1Q8NA03 581 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 GPT2Q8TD30 523 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 COPS5Q92905 334 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 CDHR1Q96JP9 859 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 RIT2Q99578 217 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 TEKT3Q9BXF9 490 aa21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 DDX41Q9UJV9 622 aaKnown RBP21.43■■□□□ 1.02
CHMP4A-201ENST00000347519 A0A1B0GVL5 298 aa21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 ZNF865P0CJ78 1059 aaPredicted RBP21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 ELNP15502 786 aa21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 CMA1P23946 247 aa21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 HOXD10P28358 340 aa21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 ADCYAP1R1P41586 468 aa21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 IRF5Q13568 498 aa21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 TMEM266Q2M3C6 531 aa21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 TRPV1Q8NER1 839 aa21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 SYMPKQ92797 1274 aaKnown RBP21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 MMTAG2Q9BU76 263 aaKnown RBP21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 ABHD16BQ9H3Z7 469 aa21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 ZHX1Q9UKY1 873 aaPredicted RBP21.42■■□□□ 1.02
CHMP4A-201ENST00000347519 NFASCO94856 1347 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 A0A087X0B3 334 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 ADCY6O43306 1168 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 CHMP2AO43633 222 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 CCNE2O96020 404 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 PPP2R5CQ13362 524 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 PDIA5Q14554 519 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 GJC2Q5T442 439 aaPredicted RBP21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 NCAPH2Q6IBW4 605 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 LRWD1Q9UFC0 647 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 WDR81Q562E7 1941 aa21.41■■□□□ 1.02
CHMP4A-201ENST00000347519 GOLGA6L4A6NEF3 574 aa21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 GNRH1P01148 92 aa21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 PFKFB1P16118 471 aa21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 CYFIP1Q7L576 1253 aa21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 SCFD2Q8WU76 684 aa21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 MRPS27Q92552 414 aaKnown RBP21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 SENP7Q9BQF6 1050 aa21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 TBC1D22BQ9NU19 505 aa21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 HPSEQ9Y251 543 aa21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 TRIM17Q9Y577 477 aa21.4■■□□□ 1.02
CHMP4A-201ENST00000347519 FAM237AA0A1B0GTK4 181 aa21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 ADCY3O60266 1144 aa21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 GGPS1O95749 300 aa21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 TXNP10599 105 aaKnown RBP21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 TGFB3P10600 412 aa21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 NDUFA8P51970 172 aa21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 CCDC144BQ3MJ40 725 aa21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 AK8Q96MA6 479 aa21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 SDF4Q9BRK5 362 aa21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 PANK2Q9BZ23 570 aa21.39■■□□□ 1.02
CHMP4A-201ENST00000347519 POTEFA5A3E0 1075 aa21.38■■□□□ 1.01
CHMP4A-201ENST00000347519 FARP2O94887 1054 aaPredicted RBP21.38■■□□□ 1.01
CHMP4A-201ENST00000347519 SMPD1P17405 629 aa21.38■■□□□ 1.01
CHMP4A-201ENST00000347519 TTLL4Q14679 1199 aa21.38■■□□□ 1.01
CHMP4A-201ENST00000347519 ECM1Q16610 540 aa21.38■■□□□ 1.01
CHMP4A-201ENST00000347519 ENGASEQ8NFI3 743 aa21.38■■□□□ 1.01
CHMP4A-201ENST00000347519 RAET1EQ8TD07 263 aa21.38■■□□□ 1.01
CHMP4A-201ENST00000347519 LRRC15Q8TF66 581 aa21.38■■□□□ 1.01
CHMP4A-201ENST00000347519 PTCH2Q9Y6C5 1203 aa21.38■■□□□ 1.01
CHMP4A-201ENST00000347519 CYBAP13498 195 aa21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 SP4Q02446 784 aa21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 ARHGEF6Q15052 776 aa21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 CELF3Q5SZQ8 465 aaKnown RBP21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 MFSD14CQ5VZR4 134 aa21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 KCNV1Q6PIU1 500 aa21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 CABP7Q86V35 215 aa21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 LENG1Q96BZ8 264 aaPredicted RBP21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 PNMA5Q96PV4 448 aa21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 CCSER1Q9C0I3 900 aa21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 JPH1Q9HDC5 661 aaPredicted RBP21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 SLC9A2Q9UBY0 812 aa21.37■■□□□ 1.01
CHMP4A-201ENST00000347519 MED24O75448 989 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 NR1I2O75469 434 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 ARHGAP1Q07960 439 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 CACNB2Q08289 660 aaPredicted RBP21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 GRB10Q13322 594 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 SNW1Q13573 536 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms