RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 INPP4AQ96PE3 977 aaPredicted RBP19.57■□□□□ 0.72
VHL-202ENST00000345392 VCPKMTQ9H867 229 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 VAT1LQ9HCJ6 419 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 KLC4Q9NSK0 619 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 BCCIPQ9P287 314 aaKnown RBP eCLIP19.57■□□□□ 0.72
VHL-202ENST00000345392 SAP30BPQ9UHR5 308 aaKnown RBP19.57■□□□□ 0.72
VHL-202ENST00000345392 MYH1P12882 1939 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 TMOD1P28289 359 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 RPS8P62241 208 aaKnown RBP19.57■□□□□ 0.72
VHL-202ENST00000345392 UNC13DQ70J99 1090 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 CYFIP2Q96F07 1278 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 PAGR1Q9BTK6 254 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 MKNK2Q9HBH9 465 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 TMBIM4Q9HC24 238 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 BIN2Q9UBW5 565 aaPredicted RBP19.57■□□□□ 0.72
VHL-202ENST00000345392 A0A087X0T9 212 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 FAM228BP0C875 321 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 ERVK-9P63128 1117 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 DDR1Q08345 913 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 COBLL1Q53SF7 1204 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 NEK8Q86SG6 692 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 GUF1Q8N442 669 aaKnown RBP19.56■□□□□ 0.72
VHL-202ENST00000345392 ZKSCAN4Q969J2 545 aaPredicted RBP19.56■□□□□ 0.72
VHL-202ENST00000345392 GOLGA6L10A6NI86 522 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 RBAK-RBAKDNI3L0D1 243 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 HSD17B3P37058 310 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 GNAQP50148 359 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 SPRED3Q2MJR0 410 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 GALNT17Q6IS24 598 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 USP38Q8NB14 1042 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 SH3RF3Q8TEJ3 882 aaPredicted RBP19.56■□□□□ 0.72
VHL-202ENST00000345392 LARP4BQ92615 738 aaKnown RBP19.56■□□□□ 0.72
VHL-202ENST00000345392 GJD4Q96KN9 370 aaPredicted RBP19.56■□□□□ 0.72
VHL-202ENST00000345392 PNMA5Q96PV4 448 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 LSM14BQ9BX40 385 aaKnown RBP19.56■□□□□ 0.72
VHL-202ENST00000345392 SCN7AQ01118 1682 aa19.56■□□□□ 0.72
VHL-202ENST00000345392 KLRF2D3W0D1 207 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 KCNK3O14649 394 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 FGFR1OPO95684 399 aaKnown RBP19.55■□□□□ 0.72
VHL-202ENST00000345392 SERPING1P05155 500 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 HSPA9P38646 679 aaKnown RBP19.55■□□□□ 0.72
VHL-202ENST00000345392 RAPGEF1Q13905 1077 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 SBK1Q52WX2 424 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 NUDT12Q9BQG2 462 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 ZMYND12Q9H0C1 365 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 TAF1DQ9H5J8 278 aaPredicted RBP19.55■□□□□ 0.72
VHL-202ENST00000345392 TMEM260Q9NX78 707 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 GRID2IPA4D2P6 1211 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 POTEMA6NI47 508 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 SSBP05455 408 aaKnown RBP eCLIP19.55■□□□□ 0.72
VHL-202ENST00000345392 TSPY3P0CV98 308 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 TSPY8P0CW00 308 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 QPCTQ16769 361 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 CDK5RAP3Q96JB5 506 aa19.55■□□□□ 0.72
VHL-202ENST00000345392 GCOM1H8Y6P7 765 aaPredicted RBP19.54■□□□□ 0.72
VHL-202ENST00000345392 TRAF5O00463 557 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 MYZAPP0CAP1 466 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 LRRC63Q05C16 580 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 UAP1Q16222 522 aaPredicted RBP19.54■□□□□ 0.72
VHL-202ENST00000345392 C6orf89Q6UWU4 347 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 KRT25Q7Z3Z0 450 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 KCNK18Q7Z418 384 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 FAM133AQ8N9E0 248 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 DDX12PQ92771 950 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 TMEM47Q9BQJ4 181 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 AP1M1Q9BXS5 423 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 SLC40A1Q9NP59 571 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 TBC1D7Q9P0N9 293 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 CEP72Q9P209 647 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 ECHS1P30084 290 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 SMTNP53814 917 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 NEUROG2Q9H2A3 272 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 DDX20Q9UHI6 824 aaKnown RBP19.54■□□□□ 0.72
VHL-202ENST00000345392 ATP6V0A2Q9Y487 856 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 PCDHGC5Q9Y5F6 944 aa19.54■□□□□ 0.72
VHL-202ENST00000345392 RASSF9O75901 435 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 CCDC172P0C7W6 258 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 CTNNA1P35221 906 aaKnown RBP19.53■□□□□ 0.72
VHL-202ENST00000345392 TNNC1P63316 161 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 SLC18A3Q16572 532 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 ODF2Q5BJF6 829 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 PPP4R3AQ6IN85 833 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 CCDC121Q6ZUS5 278 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 CCDC114Q96M63 670 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 PVALEFA0A1B0GWK0 134 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 PALM3A6NDB9 673 aaPredicted RBP19.53■□□□□ 0.72
VHL-202ENST00000345392 CHUKO15111 745 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 ATP2C2O75185 946 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 FLT3P36888 993 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 PAXIP1Q6ZW49 1069 aaPredicted RBP19.53■□□□□ 0.72
VHL-202ENST00000345392 NBPF5PQ86XG9 351 aaPredicted RBP19.53■□□□□ 0.72
VHL-202ENST00000345392 TGFBRAP1Q8WUH2 860 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 ISCUQ9H1K1 167 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 PLCB1Q9NQ66 1216 aa19.53■□□□□ 0.72
VHL-202ENST00000345392 GMNCA6NCL1 334 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 H0YGN5 161 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 RDXP35241 583 aaKnown RBP19.52■□□□□ 0.72
VHL-202ENST00000345392 C12orf60Q5U649 245 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 AMIGO3Q86WK7 504 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 MAPKAPK5Q8IW41 473 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms