RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ANO1Q5XXA6 986 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 MCTP1Q6DN14 999 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 CCDC62Q6P9F0 684 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 MOXD1Q6UVY6 613 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 PIK3AP1Q6ZUJ8 805 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 NEK8Q86SG6 692 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 TLK2Q86UE8 772 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 DHX37Q8IY37 1157 aaKnown RBP13.45□□□□□ -0.26
SNCA-202ENST00000345009 OR6J1Q8NGC5 347 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 SHISA4Q96DD7 197 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 MLXIPQ9HAP2 919 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 DAXXQ9UER7 740 aaPredicted RBP13.45□□□□□ -0.26
SNCA-202ENST00000345009 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 GNEQ9Y223 722 aaKnown RBP13.45□□□□□ -0.26
SNCA-202ENST00000345009 UBIAD1Q9Y5Z9 338 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 DNM1LO00429 736 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 RGS20O76081 388 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 PGK1P00558 417 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 ITGB5P18084 799 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 NR5A1Q13285 461 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 FSCN1Q16658 493 aaKnown RBP13.44□□□□□ -0.26
SNCA-202ENST00000345009 LY6KQ17RY6 165 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 INF2Q27J81 1249 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 PLA2G4DQ86XP0 818 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 OXER1Q8TDS5 423 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 CRYGNQ8WXF5 182 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 SDF4Q9BRK5 362 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 TSEN34Q9BSV6 310 aaKnown RBP13.44□□□□□ -0.26
SNCA-202ENST00000345009 UPF3AQ9H1J1 476 aaKnown RBP13.44□□□□□ -0.26
SNCA-202ENST00000345009 KCNH7Q9NS40 1196 aa13.44□□□□□ -0.26
SNCA-202ENST00000345009 NOL7Q9UMY1 257 aaKnown RBP13.44□□□□□ -0.26
SNCA-202ENST00000345009 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.43□□□□□ -0.26
SNCA-202ENST00000345009 NOP56O00567 594 aaKnown RBP13.43□□□□□ -0.26
SNCA-202ENST00000345009 MARCH6O60337 910 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 EN2P19622 333 aaPredicted RBP13.43□□□□□ -0.26
SNCA-202ENST00000345009 SOX10P56693 466 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 NKX3-2P78367 333 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 LRRC41Q15345 812 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 LETM2Q2VYF4 491 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 PRR16Q569H4 304 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 CELF3Q5SZQ8 465 aaKnown RBP13.43□□□□□ -0.26
SNCA-202ENST00000345009 NECAB2Q7Z6G3 386 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 NOSTRINQ8IVI9 506 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 MARVELD3Q96A59 401 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 EMID1Q96A84 441 aaPredicted RBP13.43□□□□□ -0.26
SNCA-202ENST00000345009 LCTP09848 1927 aa13.43□□□□□ -0.26
SNCA-202ENST00000345009 SYNRGQ9UMZ2 1314 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 CYP3A7-CYP3A51PA0A087WV96 503 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 MOXD2PA6NHM9 499 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 CCNT1O60563 726 aaKnown RBP13.42□□□□□ -0.26
SNCA-202ENST00000345009 ADAMTS4O75173 837 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 PPFIA4O75335 1185 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 CABYRO75952 493 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 FARP2O94887 1054 aaPredicted RBP13.42□□□□□ -0.26
SNCA-202ENST00000345009 GGPS1O95749 300 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 UBA1P22314 1058 aaKnown RBP13.42□□□□□ -0.26
SNCA-202ENST00000345009 CYP3A7P24462 503 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 U2AF2P26368 475 aaKnown RBP eCLIP13.42□□□□□ -0.26
SNCA-202ENST00000345009 CST5P28325 142 aaPredicted RBP13.42□□□□□ -0.26
SNCA-202ENST00000345009 TRAPPC10P48553 1259 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 DGKDQ16760 1214 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
SNCA-202ENST00000345009 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 PPP4R3AQ6IN85 833 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 METTL7BQ6UX53 244 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 VTI1AQ96AJ9 217 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 SPATA33Q96N06 139 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 ZNF577Q9BSK1 485 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 POLR3EQ9NVU0 708 aa13.42□□□□□ -0.26
SNCA-202ENST00000345009 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
SNCA-202ENST00000345009 A6NJR5 290 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 FAM86B1E9PN63 330 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 IPO5O00410 1097 aaKnown RBP13.41□□□□□ -0.26
SNCA-202ENST00000345009 ARIH2O95376 493 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 BAG4O95429 457 aaKnown RBP13.41□□□□□ -0.26
SNCA-202ENST00000345009 FAM86B2P0C5J1 330 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 SYT1P21579 422 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
SNCA-202ENST00000345009 KCNA10Q16322 511 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 Q4G0T1 1027 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 CYFIP1Q7L576 1253 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 KLHDC9Q8NEP7 349 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 PPTC7Q8NI37 304 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 CYP2W1Q8TAV3 490 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 TNFRSF25Q93038 417 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 LENG1Q96BZ8 264 aaPredicted RBP13.41□□□□□ -0.26
SNCA-202ENST00000345009 GLT1D1Q96MS3 346 aa13.41□□□□□ -0.26
SNCA-202ENST00000345009 AGO4Q9HCK5 861 aaKnown RBP13.41□□□□□ -0.26
SNCA-202ENST00000345009 DDX25Q9UHL0 483 aaKnown RBP13.41□□□□□ -0.26
SNCA-202ENST00000345009 NFASCO94856 1347 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 ADCY6O43306 1168 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 ARP10275 920 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 ACLYP53396 1101 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 SP2Q02086 613 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 ARHGAP1Q07960 439 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 ORC2Q13416 577 aaPredicted RBP13.4□□□□□ -0.26
SNCA-202ENST00000345009 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 AFG1LQ8WV93 481 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms