RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 MLLT1Q03111 559 aaPredicted RBP23.64■■□□□ 1.37
SMARCB1-202ENST00000344921 HSDL1Q3SXM5 330 aa23.64■■□□□ 1.37
SMARCB1-202ENST00000344921 EARS2Q5JPH6 523 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-202ENST00000344921 METTL7BQ6UX53 244 aa23.64■■□□□ 1.37
SMARCB1-202ENST00000344921 PPTC7Q8NI37 304 aa23.64■■□□□ 1.37
SMARCB1-202ENST00000344921 INTS4Q96HW7 963 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-202ENST00000344921 UIMC1Q96RL1 719 aa23.64■■□□□ 1.37
SMARCB1-202ENST00000344921 SDF4Q9BRK5 362 aa23.64■■□□□ 1.37
SMARCB1-202ENST00000344921 IGLV3-22A0A075B6J6 115 aa23.63■■□□□ 1.37
SMARCB1-202ENST00000344921 FAM205CA6NFA0 338 aa23.63■■□□□ 1.37
SMARCB1-202ENST00000344921 MMP3P08254 477 aa23.63■■□□□ 1.37
SMARCB1-202ENST00000344921 DGKDQ16760 1214 aa23.63■■□□□ 1.37
SMARCB1-202ENST00000344921 MCTP1Q6DN14 999 aa23.63■■□□□ 1.37
SMARCB1-202ENST00000344921 TNFRSF25Q93038 417 aa23.63■■□□□ 1.37
SMARCB1-202ENST00000344921 ZNF577Q9BSK1 485 aa23.63■■□□□ 1.37
SMARCB1-202ENST00000344921 FOXP1Q9H334 677 aaPredicted RBP23.63■■□□□ 1.37
SMARCB1-202ENST00000344921 AGO4Q9HCK5 861 aaKnown RBP23.63■■□□□ 1.37
SMARCB1-202ENST00000344921 TDP2O95551 362 aa23.62■■□□□ 1.37
SMARCB1-202ENST00000344921 EDIL3O43854 480 aa23.62■■□□□ 1.37
SMARCB1-202ENST00000344921 CCNT1O60563 726 aaKnown RBP23.62■■□□□ 1.37
SMARCB1-202ENST00000344921 KPNA6O60684 536 aa23.62■■□□□ 1.37
SMARCB1-202ENST00000344921 CABYRO75952 493 aa23.62■■□□□ 1.37
SMARCB1-202ENST00000344921 DPF3Q92784 378 aa23.62■■□□□ 1.37
SMARCB1-202ENST00000344921 DNAH12Q6ZR08 3092 aa23.61■■□□□ 1.37
SMARCB1-202ENST00000344921 IPO5O00410 1097 aaKnown RBP23.61■■□□□ 1.37
SMARCB1-202ENST00000344921 CHMP4BP1P59074 171 aa23.61■■□□□ 1.37
SMARCB1-202ENST00000344921 PURAQ00577 322 aaKnown RBP23.61■■□□□ 1.37
SMARCB1-202ENST00000344921 SLC39A5Q6ZMH5 540 aa23.61■■□□□ 1.37
SMARCB1-202ENST00000344921 NAP1L4Q99733 375 aaKnown RBP23.61■■□□□ 1.37
SMARCB1-202ENST00000344921 JPH1Q9HDC5 661 aaPredicted RBP23.61■■□□□ 1.37
SMARCB1-202ENST00000344921 DDX25Q9UHL0 483 aaKnown RBP23.61■■□□□ 1.37
SMARCB1-202ENST00000344921 DDX39AO00148 427 aaKnown RBP23.6■■□□□ 1.37
SMARCB1-202ENST00000344921 MOXD1Q6UVY6 613 aa23.6■■□□□ 1.37
SMARCB1-202ENST00000344921 MTG1Q9BT17 334 aaPredicted RBP23.6■■□□□ 1.37
SMARCB1-202ENST00000344921 SLC9A2Q9UBY0 812 aa23.6■■□□□ 1.37
SMARCB1-202ENST00000344921 ELP1O95163 1332 aa23.6■■□□□ 1.37
SMARCB1-202ENST00000344921 CYP3A7-CYP3A51PA0A087WV96 503 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 PPFIA4O75335 1185 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 ATP2B1P20020 1258 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 PDCP20941 246 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 CYP3A7P24462 503 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 ITGB3BPQ13352 177 aaPredicted RBP23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 Q4G0T1 1027 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 NOSTRINQ8IVI9 506 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 LENG9Q96B70 501 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 TCEAL9Q9UHQ7 104 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 NFASCO94856 1347 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 GCFC2P16383 781 aaKnown RBP23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 LRRC26Q2I0M4 334 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 GPR20Q99678 358 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 TBC1D22BQ9NU19 505 aa23.59■■□□□ 1.37
SMARCB1-202ENST00000344921 A0A0U1RQG5 324 aaPredicted RBP23.58■■□□□ 1.37
SMARCB1-202ENST00000344921 KIF28PB7ZC32 967 aa23.58■■□□□ 1.37
SMARCB1-202ENST00000344921 MSH4O15457 936 aa23.58■■□□□ 1.37
SMARCB1-202ENST00000344921 MARCH6O60337 910 aa23.58■■□□□ 1.37
SMARCB1-202ENST00000344921 PSMC6P62333 389 aa23.58■■□□□ 1.37
SMARCB1-202ENST00000344921 PPP4R3AQ6IN85 833 aa23.58■■□□□ 1.37
SMARCB1-202ENST00000344921 SPRYD3Q8NCJ5 442 aa23.58■■□□□ 1.37
SMARCB1-202ENST00000344921 VPS37CA5D8V6 355 aaPredicted RBP23.57■■□□□ 1.36
SMARCB1-202ENST00000344921 EVI5O60447 810 aa23.57■■□□□ 1.36
SMARCB1-202ENST00000344921 ZNF286BP0CG31 522 aa23.57■■□□□ 1.36
SMARCB1-202ENST00000344921 ITGA7Q13683 1181 aa23.57■■□□□ 1.36
SMARCB1-202ENST00000344921 SEPT1Q8WYJ6 367 aa23.57■■□□□ 1.36
SMARCB1-202ENST00000344921 ATP11BQ9Y2G3 1177 aa23.57■■□□□ 1.36
SMARCB1-202ENST00000344921 TELO2Q9Y4R8 837 aa23.57■■□□□ 1.36
SMARCB1-202ENST00000344921 SLC37A4O43826 429 aa23.56■■□□□ 1.36
SMARCB1-202ENST00000344921 U2AF2P26368 475 aaKnown RBP eCLIP23.56■■□□□ 1.363e-8■□□□□ 9.3
SMARCB1-202ENST00000344921 UTP14CQ5TAP6 766 aaKnown RBP23.56■■□□□ 1.36
SMARCB1-202ENST00000344921 MBOAT7Q96N66 472 aa23.56■■□□□ 1.36
SMARCB1-202ENST00000344921 NOL7Q9UMY1 257 aaKnown RBP23.56■■□□□ 1.36
SMARCB1-202ENST00000344921 TCF7P36402 384 aaPredicted RBP23.56■■□□□ 1.36
SMARCB1-202ENST00000344921 RTP1P59025 263 aa23.56■■□□□ 1.36
SMARCB1-202ENST00000344921 GAS7O60861 476 aa23.55■■□□□ 1.36
SMARCB1-202ENST00000344921 LGALS2P05162 132 aa23.55■■□□□ 1.36
SMARCB1-202ENST00000344921 LRCH2Q5VUJ6 765 aa23.55■■□□□ 1.36
SMARCB1-202ENST00000344921 GJA10Q969M2 543 aa23.55■■□□□ 1.36
SMARCB1-202ENST00000344921 KATNAL1Q9BW62 490 aa23.55■■□□□ 1.36
SMARCB1-202ENST00000344921 ARVCFO00192 962 aa23.54■■□□□ 1.36
SMARCB1-202ENST00000344921 DHX15O43143 795 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-202ENST00000344921 PQBP1O60828 265 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-202ENST00000344921 HOXD8P13378 290 aaPredicted RBP23.54■■□□□ 1.36
SMARCB1-202ENST00000344921 ACTR2P61160 394 aa23.54■■□□□ 1.36
SMARCB1-202ENST00000344921 BECN1Q14457 450 aa23.54■■□□□ 1.36
SMARCB1-202ENST00000344921 TRIM60Q495X7 471 aa23.54■■□□□ 1.36
SMARCB1-202ENST00000344921 FAM47CQ5HY64 1035 aa23.54■■□□□ 1.36
SMARCB1-202ENST00000344921 TEKT3Q9BXF9 490 aa23.54■■□□□ 1.36
SMARCB1-202ENST00000344921 GSTTP1A0A1W2PQM5 241 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 SYT1P21579 422 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 MCM7P33993 719 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 NBPF20Q3BBV1 942 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 C1orf53Q5VUE5 145 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 POTEDQ86YR6 584 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 C7orf61Q8IZ16 206 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 PPP1R13LQ8WUF5 828 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 SLC5A5Q92911 643 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 RIT2Q99578 217 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 SAMM50Q9Y512 469 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 MROH7Q68CQ1 1323 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 H3BRB1 525 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 BAG4O95429 457 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms