RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 DDX53Q86TM3 631 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-202ENST00000344404 OR6B3Q8NGW1 331 aa13.25□□□□□ -0.29
TRIOBP-202ENST00000344404 ZKSCAN5Q9Y2L8 839 aa13.25□□□□□ -0.29
TRIOBP-202ENST00000344404 CFLARO15519 480 aa13.25□□□□□ -0.29
TRIOBP-202ENST00000344404 DNAJC17Q9NVM6 304 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-202ENST00000344404 SFI1A8K8P3 1242 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 NCF2P19878 526 aaPredicted RBP13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 IFNAR2P48551 515 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 SMYD4Q8IYR2 804 aaPredicted RBP13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 MMP19Q99542 508 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 CYP4F22Q6NT55 531 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 MLKLQ8NB16 471 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 LRRC8CQ8TDW0 803 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 DEPDC1BQ8WUY9 529 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 BTN2A2Q8WVV5 523 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 TNKSO95271 1327 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 TTLL1O95922 423 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 MTMR3Q13615 1198 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 GLE1Q53GS7 698 aaKnown RBP13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 ATP6V0A1Q93050 837 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 PPP1R9AQ9ULJ8 1098 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 MAPK4P31152 587 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 TUBB4BP68371 445 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 MXD4Q14582 209 aaPredicted RBP13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 ARHGEF18Q6ZSZ5 1173 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 RTKN2Q8IZC4 609 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 NCLNQ969V3 563 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 Q9H521 79 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 YEATS2Q9ULM3 1422 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 ECE2O60344 883 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 SPON1Q9HCB6 807 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 ARHGAP6O43182 974 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 ELMSAN1Q6PJG2 1045 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 ERLEC1Q96DZ1 483 aa13.24□□□□□ -0.29
TRIOBP-202ENST00000344404 POLR3CQ9BUI4 534 aaPredicted RBP13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 FBXL5Q9UKA1 691 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 SLC4A7Q9Y6M7 1214 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 PI4K2BG5E9Z4 385 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 PRPF4O43172 522 aaKnown RBP eCLIP13.23□□□□□ -0.291e-6■■■■□ 22.4
TRIOBP-202ENST00000344404 DAB2P98082 770 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 MFSD14CQ5VZR4 134 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 CACTINQ8WUQ7 758 aaKnown RBP13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 CLTAP09496 248 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 CXCR5P32302 372 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 RECQLP46063 649 aaPredicted RBP13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 EIF4A1P60842 406 aaKnown RBP13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 NACC1Q96RE7 527 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 EPS15L1Q9UBC2 864 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 NUMBP49757 651 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 PTGDRQ13258 359 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 ZSCAN9O15535 394 aaPredicted RBP13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 KRT1P04264 644 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 RPN1P04843 607 aaKnown RBP13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 IL13P35225 146 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 EHHADHQ08426 723 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 EXOC3L4Q17RC7 722 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 TMTC1Q8IUR5 882 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 UBE2TQ9NPD8 197 aaPredicted RBP13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 KCNH4Q9UQ05 1017 aa13.23□□□□□ -0.29
TRIOBP-202ENST00000344404 KDM2BQ8NHM5 1336 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 ZMYND10O75800 440 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 DDAH1O94760 285 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 SERPIND1P05546 499 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 PEX19P40855 299 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 TMED2Q15363 201 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 KCTD16Q68DU8 428 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 URGCPQ8TCY9 931 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 SYMPKQ92797 1274 aaKnown RBP13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 RPF1Q9H9Y2 349 aaKnown RBP13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 COL4A3BPQ9Y5P4 624 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 PRR23AA6NEV1 266 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 SYDE2Q5VT97 1194 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 STAG1Q8WVM7 1258 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 TMEM247A6NEH6 219 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 ZKSCAN8Q15776 578 aaPredicted RBP13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 HIF1AQ16665 826 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 TAGAPQ8N103 731 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 CCDC124Q96CT7 223 aaKnown RBP13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 ATG3Q9NT62 314 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 LARSQ9P2J5 1176 aaKnown RBP13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 ARL4AP40617 200 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 FAM83BQ5T0W9 1011 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 ABTB1Q969K4 478 aaPredicted RBP13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 MASTLQ96GX5 879 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 MFAP3P55082 362 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 MYO1EQ12965 1108 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 ART3Q13508 389 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 PHLDB3Q6NSJ2 640 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 NUDCD3Q8IVD9 361 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 POLD4Q9HCU8 107 aa13.22□□□□□ -0.29
TRIOBP-202ENST00000344404 ANP32DO95626 131 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 GH2P01242 217 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 TMEM62Q0P6H9 643 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 PROSER3Q2NL68 480 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 SH3KBP1Q96B97 665 aa13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 XPO4Q9C0E2 1151 aaKnown RBP13.21□□□□□ -0.29
TRIOBP-202ENST00000344404 KCNG1Q9UIX4 513 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms