RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 NSUN2Q08J23 767 aaKnown RBP eCLIP9.63□□□□□ -0.87
SP140-201ENST00000343805 NR1H3Q13133 447 aa9.63□□□□□ -0.87
SP140-201ENST00000343805 CCDC92Q53HC0 331 aaPredicted RBP9.63□□□□□ -0.87
SP140-201ENST00000343805 TOGARAM2Q6ZUX3 1019 aa9.63□□□□□ -0.87
SP140-201ENST00000343805 VSTM4Q8IW00 320 aa9.63□□□□□ -0.87
SP140-201ENST00000343805 APLFQ8IW19 511 aaPredicted RBP9.63□□□□□ -0.87
SP140-201ENST00000343805 ZNF34Q8IZ26 560 aa9.63□□□□□ -0.87
SP140-201ENST00000343805 GALNT15Q8N3T1 639 aa9.63□□□□□ -0.87
SP140-201ENST00000343805 EEF2KMTQ96G04 330 aa9.63□□□□□ -0.87
SP140-201ENST00000343805 MTRQ99707 1265 aa9.63□□□□□ -0.87
SP140-201ENST00000343805 CORO1BQ9BR76 489 aa9.63□□□□□ -0.87
SP140-201ENST00000343805 LZTFL1Q9NQ48 299 aa9.63□□□□□ -0.87
SP140-201ENST00000343805 CXXC1Q9P0U4 656 aaPredicted RBP9.63□□□□□ -0.87
SP140-201ENST00000343805 FBXO2Q9UK22 296 aaPredicted RBP9.63□□□□□ -0.87
SP140-201ENST00000343805 LAMB4A4D0S4 1761 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 MAGEB6P1A0A0J9YX57 407 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 A0A0U1RQJ8 604 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 SMNDC1O75940 238 aaKnown RBP eCLIP9.62□□□□□ -0.87
SP140-201ENST00000343805 DEXIO95424 95 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 VEGFAP15692 232 aaPredicted RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 IL6STP40189 918 aaPredicted RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 SLMAPQ14BN4 828 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 CCDC152Q4G0S7 254 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 FAM26DQ5JW98 314 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 PACS1Q6VY07 963 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 GPR161Q8N6U8 529 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 ATRIPQ8WXE1 791 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 WASF1Q92558 559 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 RSRC1Q96IZ7 334 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 SAP130Q9H0E3 1048 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 TFCP2L1Q9NZI6 479 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 RABL2AQ9UBK7 228 aaPredicted RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 VTI1BQ9UEU0 232 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 ITGB1BP2Q9UKP3 347 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 TNS2Q63HR2 1409 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 A0A087X0B3 334 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 TADA3O75528 432 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 RASSF9O75901 435 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 STK10O94804 968 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 SEC31AO94979 1220 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 PTPREP23469 700 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 USP11P51784 963 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 HDAC4P56524 1084 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 RILPL1Q5EBL4 403 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 IFIT1BQ5T764 474 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 CCDC70Q6NSX1 233 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 C3orf67Q6ZVT6 689 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 SPATS2Q86XZ4 545 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 ZNF454Q8N9F8 522 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 SHISA4Q96DD7 197 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 WDR24Q96S15 920 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 SLC39A2Q9NP94 309 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 KLC4Q9NSK0 619 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 VPS18Q9P253 973 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 HOOK1Q9UJC3 728 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 GMEB1Q9Y692 573 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 WDR19Q8NEZ3 1342 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 PSDA5PKW4 1024 aaPredicted RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 EBAG9O00559 213 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 GPR182O15218 404 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 MPSTP25325 297 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 CCT6AP40227 531 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 BTG3Q14201 252 aaPredicted RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 ZNF746Q6NUN9 644 aaPredicted RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 ATCAYQ86WG3 371 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 TRIM58Q8NG06 486 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 HNRNPLLQ8WVV9 542 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 MED15Q96RN5 788 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 PLIN2Q99541 437 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 PAPOLBQ9NRJ5 636 aaKnown RBP9.62□□□□□ -0.87
SP140-201ENST00000343805 AATFQ9NY61 560 aaKnown RBP eCLIP9.62□□□□□ -0.87
SP140-201ENST00000343805 PPP2R2CQ9Y2T4 447 aa9.62□□□□□ -0.87
SP140-201ENST00000343805 ABCC6O95255 1503 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 ABCC12Q96J65 1359 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 TRIM75PA6NK02 468 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 KCNQ2O43526 872 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 CEP104O60308 925 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 LDHBP07195 334 aaKnown RBP9.61□□□□□ -0.87
SP140-201ENST00000343805 CTSHP09668 335 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 KLRK1P26718 216 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 SLC8A1P32418 973 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 CUL3Q13618 768 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 PLEKHG6Q3KR16 790 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 ENAHQ8N8S7 591 aaPredicted RBP9.61□□□□□ -0.87
SP140-201ENST00000343805 ESR2Q92731 530 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 TRIM11Q96F44 468 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 ZNF512BQ96KM6 892 aaPredicted RBP9.61□□□□□ -0.87
SP140-201ENST00000343805 TMEM134Q9H6X4 195 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 PHF24Q9UPV7 400 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 CTDP1Q9Y5B0 961 aaPredicted RBP9.61□□□□□ -0.87
SP140-201ENST00000343805 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.61□□□□□ -0.87
SP140-201ENST00000343805 SHOX2O60902 331 aaPredicted RBP9.61□□□□□ -0.87
SP140-201ENST00000343805 MCM7P33993 719 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 SCNN1BP51168 640 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 ITPK1Q13572 414 aa9.61□□□□□ -0.87
SP140-201ENST00000343805 CEP85LQ5SZL2 805 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms