RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 KLHL42Q9P2K6 505 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 MYH7BA7E2Y1 1941 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 DCXO43602 365 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 GH1P01241 217 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 TOP1P11387 765 aaKnown RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 TDO2P48775 406 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 CLCN5P51795 746 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 PLCB3Q01970 1234 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 CREMQ03060 361 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 TAF2Q6P1X5 1199 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 SERINC5Q86VE9 423 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 MSLNLQ96KJ4 702 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 WNT8AQ9H1J5 351 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 EHMT1Q9H9B1 1298 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 GTF2IRD1Q9UHL9 959 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 NOB1Q9ULX3 412 aaKnown RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 CHMP3Q9Y3E7 222 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 IRAK3Q9Y616 596 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 ASTN1O14525 1302 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 NUP210Q8TEM1 1887 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 K7ELQ4 463 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 BMP3P12645 472 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 ALDH5A1P51649 535 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 JAG1P78504 1218 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 TRDNQ13061 729 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 ZKSCAN8Q15776 578 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 C11orf91Q3C1V1 193 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 SUGP1Q8IWZ8 645 aaKnown RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 GOLGA6L1Q8N7Z2 621 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 TGFBRAP1Q8WUH2 860 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 SSX2IPQ9Y2D8 614 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 PLXNA4Q9HCM2 1894 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 MBLAC1A4D2B0 266 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 TMEM8BA6NDV4 472 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 PPP1R12AO14974 1030 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 PPFIA4O75335 1185 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 LGR5O75473 907 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 TPM3P06753 285 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 SCP2P22307 547 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 CCL14Q16627 93 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 KMT5BQ4FZB7 885 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 MCTP1Q6DN14 999 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 PHLDB3Q6NSJ2 640 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 EXOC8Q8IYI6 725 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 CLASRPQ8N2M8 674 aaKnown RBP8.35□□□□□ -1.07
ZNF540-202ENST00000343599 HIPK3Q9H422 1215 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 TMEM63CQ9P1W3 806 aa8.35□□□□□ -1.07
ZNF540-202ENST00000343599 RRN3P2A6NIE6 340 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 STAT2P52630 851 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 MGAT3Q09327 533 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 TRIM32Q13049 653 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 GRIN2CQ14957 1233 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 TSPAN18Q96SJ8 248 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 FAM126AQ9BYI3 521 aaPredicted RBP8.34□□□□□ -1.07
ZNF540-202ENST00000343599 TTC12Q9H892 705 aaPredicted RBP8.34□□□□□ -1.07
ZNF540-202ENST00000343599 ZBTB40Q9NUA8 1239 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 A0A1W2PRG0 241 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 SYCE3A1L190 88 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 EIF3JO75822 258 aaKnown RBP8.34□□□□□ -1.07
ZNF540-202ENST00000343599 ASGR1P07306 291 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 LIMK1P53667 647 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 NUCB2P80303 420 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 TTLL4Q14679 1199 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 ZMYM1Q5SVZ6 1142 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 FAM184AQ8NB25 1140 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 RDM1Q8NG50 284 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 MYLIPQ8WY64 445 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 KIF2CQ99661 725 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 C11orf84Q9BUA3 381 aaPredicted RBP8.34□□□□□ -1.07
ZNF540-202ENST00000343599 TSPY26PQ9H489 355 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 PAG1Q9NWQ8 432 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 DPP7Q9UHL4 492 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 NR2E1Q9Y466 385 aa8.34□□□□□ -1.07
ZNF540-202ENST00000343599 GRIN2DO15399 1336 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 GALR2O43603 387 aaPredicted RBP8.33□□□□□ -1.08
ZNF540-202ENST00000343599 GJB5O95377 273 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 TRIM27P14373 513 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 ZP2Q05996 745 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 DNAJC21Q5F1R6 531 aaKnown RBP8.33□□□□□ -1.08
ZNF540-202ENST00000343599 NPAS4Q8IUM7 802 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 C10orf67Q8IYJ2 551 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 ALG13Q9NP73 1137 aaKnown RBP8.33□□□□□ -1.08
ZNF540-202ENST00000343599 RNF113AO15541 343 aaKnown RBP8.33□□□□□ -1.08
ZNF540-202ENST00000343599 LINC00271P0C7V0 271 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 SKIP12755 728 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 ATP2A2P16615 1042 aaKnown RBP8.33□□□□□ -1.08
ZNF540-202ENST00000343599 HOXA6P31267 233 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 FAM189BP81408 668 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 PRKG1Q13976 671 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 C9orf50Q5SZB4 431 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 ADGRA1Q86SQ6 560 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 SRLQ86TD4 932 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 TLK2Q86UE8 772 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 RHPN1Q8TCX5 695 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 UBE2ZQ9H832 354 aaPredicted RBP8.33□□□□□ -1.08
ZNF540-202ENST00000343599 ZMYND8Q9ULU4 1186 aaPredicted RBP8.33□□□□□ -1.08
ZNF540-202ENST00000343599 PAXBP1Q9Y5B6 917 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 SCN5AQ14524 2016 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 PHLPP2Q6ZVD8 1323 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms