RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 CCDC188H7C350 402 aa20.26■□□□□ 0.83
SMPD1-201ENST00000342245 O00370 1275 aa20.26■□□□□ 0.83
SMPD1-201ENST00000342245 UBOX5O94941 541 aa20.26■□□□□ 0.83
SMPD1-201ENST00000342245 BAG3O95817 575 aa20.26■□□□□ 0.83
SMPD1-201ENST00000342245 CHN1P15882 459 aa20.26■□□□□ 0.83
SMPD1-201ENST00000342245 TMC3Q7Z5M5 1100 aa20.26■□□□□ 0.83
SMPD1-201ENST00000342245 PGM2Q96G03 612 aa20.26■□□□□ 0.83
SMPD1-201ENST00000342245 ELAC2Q9BQ52 826 aaKnown RBP20.26■□□□□ 0.83
SMPD1-201ENST00000342245 TRIM7Q9C029 511 aa20.26■□□□□ 0.83
SMPD1-201ENST00000342245 F8VZ95 297 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 ALX1Q15699 326 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 TTC38Q5R3I4 469 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 SESTD1Q86VW0 696 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 LRRC34Q8IZ02 419 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 GIMAP8Q8ND71 665 aaPredicted RBP20.25■□□□□ 0.83
SMPD1-201ENST00000342245 CNOT6LQ96LI5 555 aaKnown RBP20.25■□□□□ 0.83
SMPD1-201ENST00000342245 FAM114A2Q9NRY5 505 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 RHOBTB3O94955 611 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 GSTA2P09210 222 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 PCK1P35558 622 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 KLK7P49862 253 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 RASSF7Q02833 373 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 KLC1Q07866 573 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 TRADDQ15628 312 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 NAB2Q15742 525 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 C1QTNF12Q5T7M4 302 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 SPICE1Q8N0Z3 855 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 CNBD1Q8NA66 436 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 CFAP61Q8NHU2 1237 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 SCFD2Q8WU76 684 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 SALL4Q9UJQ4 1053 aa20.25■□□□□ 0.83
SMPD1-201ENST00000342245 SUN1O94901 812 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 TRAPPC10P48553 1259 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 PMS1P54277 932 aaKnown RBP20.24■□□□□ 0.83
SMPD1-201ENST00000342245 TSNAXIP1Q2TAA8 658 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 ASTE1Q2TB18 679 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-201ENST00000342245 ARMC3Q5W041 872 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 ANKLE2Q86XL3 938 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 KLHL7Q8IXQ5 586 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 STAG2Q8N3U4 1231 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 MIPOL1Q8TD10 442 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 ACTRT1Q8TDG2 376 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 PLEKHG4BQ96PX9 1271 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 STMN4Q9H169 189 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-201ENST00000342245 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMPD1-201ENST00000342245 USP15Q9Y4E8 981 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-201ENST00000342245 ZSCAN9O15535 394 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-201ENST00000342245 PALMO75781 387 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 KRT16P08779 473 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 ACADSP16219 412 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 GNAZP19086 355 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 CCNE1P24864 410 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 LONP1P36776 959 aaKnown RBP20.24■□□□□ 0.83
SMPD1-201ENST00000342245 FOXO4P98177 505 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 MIIPQ5JXC2 388 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 PHF20Q9BVI0 1012 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 ABCF3Q9NUQ8 709 aa20.24■□□□□ 0.83
SMPD1-201ENST00000342245 INTS9Q9NV88 658 aaKnown RBP20.24■□□□□ 0.83
SMPD1-201ENST00000342245 CCDC169A6NNP5 214 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 BUB1O43683 1085 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 SNX3O60493 162 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 OAS1P00973 400 aaKnown RBP20.23■□□□□ 0.83
SMPD1-201ENST00000342245 PTGDRQ13258 359 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 ASRGL1Q7L266 308 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 MDM1Q8TC05 714 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 SLITRK6Q9H5Y7 841 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 CEP126Q9P2H0 1117 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 DENND2AQ9ULE3 1009 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 PXDNQ92626 1479 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 ABCB11O95342 1321 aa20.23■□□□□ 0.83
SMPD1-201ENST00000342245 DCDC2CA8MYV0 355 aa20.22■□□□□ 0.83
SMPD1-201ENST00000342245 STAT6P42226 847 aa20.22■□□□□ 0.83
SMPD1-201ENST00000342245 ARL6IP4Q66PJ3 421 aaKnown RBP20.22■□□□□ 0.83
SMPD1-201ENST00000342245 PRCCQ92733 491 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-201ENST00000342245 P2RX5Q93086 422 aa20.22■□□□□ 0.83
SMPD1-201ENST00000342245 DUSP9Q99956 384 aaKnown RBP20.22■□□□□ 0.83
SMPD1-201ENST00000342245 FBXO3Q9UK99 471 aa20.22■□□□□ 0.83
SMPD1-201ENST00000342245 RGPD2P0DJD1 1756 aa20.22■□□□□ 0.83
SMPD1-201ENST00000342245 CCDC152Q4G0S7 254 aa20.22■□□□□ 0.83
SMPD1-201ENST00000342245 SEC14L1Q92503 715 aa20.22■□□□□ 0.83
SMPD1-201ENST00000342245 TBC1D5Q92609 795 aa20.22■□□□□ 0.83
SMPD1-201ENST00000342245 ORAI2Q96SN7 254 aa20.22■□□□□ 0.83
SMPD1-201ENST00000342245 CREB3O43889 395 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 NUDT17P0C025 328 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 MYL6BP14649 208 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 ADAM9Q13443 819 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 ZSWIM5Q9P217 1185 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 PNMA2Q9UL42 364 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 PCDHGA4Q9Y5G9 962 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 SPDYE5A6NIY4 337 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 FAM163BP0C2L3 166 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 CALB2P22676 271 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 WTAPQ15007 396 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 ZNF174Q15697 407 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 TRIM68Q6AZZ1 485 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
SMPD1-201ENST00000342245 NBPF15Q8N660 670 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 SH3TC2Q8TF17 1288 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 SYN2Q92777 582 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms