RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 TMEM221A6NGB7 291 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 M0R296 226 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 ST18O60284 1047 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 GGPS1O95749 300 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 SMIM10L2AP0DMW4 78 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 SMIM10L2BP0DMW5 78 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 BMPR1AP36894 532 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 SMAD4Q13485 552 aaKnown RBP19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 CAMK1Q14012 370 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 GPATCH4Q5T3I0 446 aaKnown RBP19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 TRIM67Q6ZTA4 783 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 TBC1D10CQ8IV04 446 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 FIBCD1Q8N539 461 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 IL31RAQ8NI17 732 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 PBXIP1Q96AQ6 731 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 IL17RAQ96F46 866 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 FAM227BQ96M60 508 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 POP1Q99575 1024 aaKnown RBP19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 FAM86C1Q9NVL1 165 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 PLXNA3P51805 1871 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 KAT6AQ92794 2004 aa19.13■□□□□ 0.65
NECTIN1-202ENST00000340882 SPTBN4Q9H254 2564 aa19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 NCK2O43639 380 aa19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 CFBP00751 764 aa19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 MYCLP12524 364 aaPredicted RBP19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 PTPN5P54829 565 aa19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 MIER1Q8N108 512 aa19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 MAF1Q9H063 256 aa19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 RC3H2Q9HBD1 1191 aaKnown RBP19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 CD207Q9UJ71 328 aa19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 SUPT16HQ9Y5B9 1047 aaKnown RBP19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 MYO15AQ9UKN7 3530 aa19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 TTC3P53804 2025 aa19.12■□□□□ 0.65
NECTIN1-202ENST00000340882 CACNA1HO95180 2353 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 NEDD4P46934 1319 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 SALL3Q9BXA9 1300 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 A0A0D9SFI3 127 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 H3BRB1 525 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 UBA1P22314 1058 aaKnown RBP19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 ADAM15Q13444 863 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 MCF2L2Q86YR7 1114 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 MSLNLQ96KJ4 702 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 PDCD2LQ9BRP1 358 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 LMAN2LQ9H0V9 348 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 TUT1Q9H6E5 874 aaKnown RBP19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 JMJD4Q9H9V9 463 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 VAT1LQ9HCJ6 419 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 TELO2Q9Y4R8 837 aa19.11■□□□□ 0.65
NECTIN1-202ENST00000340882 PLXNA4Q9HCM2 1894 aa19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 RB1P06400 928 aa19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 HSPD1P10809 573 aaKnown RBP19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 MX1P20591 662 aa19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 DNAJB1P25685 340 aa19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 HSD17B4P51659 736 aa19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 ZNF589Q86UQ0 364 aaPredicted RBP19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 C11orf84Q9BUA3 381 aaPredicted RBP19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 HELLSQ9NRZ9 838 aa19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 SETD4Q9NVD3 440 aa19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 MRPL11Q9Y3B7 192 aaKnown RBP19.1■□□□□ 0.65
NECTIN1-202ENST00000340882 ADGRA3Q8IWK6 1321 aa19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 LGALS2P05162 132 aa19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 VCPP55072 806 aaKnown RBP19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 ZXDAP98168 799 aa19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 MFSD6Q6ZSS7 791 aa19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 ADGRD2Q7Z7M1 963 aa19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 PNMA1Q8ND90 353 aa19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 CLP1Q92989 425 aaKnown RBP19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 CLEC1BQ9P126 229 aa19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 LOXHD1Q8IVV2 1947 aa19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 LAMA4Q16363 1823 aa19.09■□□□□ 0.65
NECTIN1-202ENST00000340882 LOC730098B7Z3J9 87 aa19.08■□□□□ 0.64
NECTIN1-202ENST00000340882 PPP1R11O60927 126 aaPredicted RBP19.08■□□□□ 0.64
NECTIN1-202ENST00000340882 EYA4O95677 639 aa19.08■□□□□ 0.64
NECTIN1-202ENST00000340882 MMP1P03956 469 aa19.08■□□□□ 0.64
NECTIN1-202ENST00000340882 PGM5Q15124 567 aa19.08■□□□□ 0.64
NECTIN1-202ENST00000340882 FAM26DQ5JW98 314 aa19.08■□□□□ 0.64
NECTIN1-202ENST00000340882 VSIG10LQ86VR7 867 aa19.08■□□□□ 0.64
NECTIN1-202ENST00000340882 BAZ2BQ9UIF8 2168 aaKnown RBP19.08■□□□□ 0.64
NECTIN1-202ENST00000340882 GFRA3O60609 400 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 CAND2O75155 1236 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 CHRNA1P02708 482 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 HOXA13P31271 388 aaPredicted RBP19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 RRP1P56182 461 aaKnown RBP19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 ADAM17P78536 824 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 GHRHRQ02643 423 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 STOX1Q6ZVD7 989 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 DGKHQ86XP1 1220 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 TRIM50Q86XT4 487 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 FBXL6Q8N531 539 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 APBB2Q92870 758 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 ZNF689Q96CS4 500 aaPredicted RBP19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 MLXIPQ9HAP2 919 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 RCAN3Q9UKA8 241 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 PLAGL2Q9UPG8 496 aa19.07■□□□□ 0.64
NECTIN1-202ENST00000340882 ZMYM6O95789 1325 aa19.06■□□□□ 0.64
NECTIN1-202ENST00000340882 GHRP10912 638 aa19.06■□□□□ 0.64
NECTIN1-202ENST00000340882 NDUFV1P49821 464 aa19.06■□□□□ 0.64
NECTIN1-202ENST00000340882 MCMDC2Q4G0Z9 681 aa19.06■□□□□ 0.64
NECTIN1-202ENST00000340882 KCNV1Q6PIU1 500 aa19.06■□□□□ 0.64
NECTIN1-202ENST00000340882 SUGP1Q8IWZ8 645 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms