RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CHURC1Q8WUH1 139 aa16.77■□□□□ 0.27
BRAT1-201ENST00000340611 STAMQ92783 540 aa16.77■□□□□ 0.27
BRAT1-201ENST00000340611 IRX2Q9BZI1 471 aaPredicted RBP16.77■□□□□ 0.27
BRAT1-201ENST00000340611 SRPRBQ9Y5M8 271 aaKnown RBP16.77■□□□□ 0.27
BRAT1-201ENST00000340611 POLR2DO15514 142 aaKnown RBP16.76■□□□□ 0.27
BRAT1-201ENST00000340611 CASP1P29466 404 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 ATP2C1P98194 919 aaPredicted RBP16.76■□□□□ 0.27
BRAT1-201ENST00000340611 MKRN3Q13064 507 aaKnown RBP16.76■□□□□ 0.27
BRAT1-201ENST00000340611 KRT25Q7Z3Z0 450 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 NEK8Q86SG6 692 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 SYMPKQ92797 1274 aaKnown RBP16.76■□□□□ 0.27
BRAT1-201ENST00000340611 DHX58Q96C10 678 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 ATG4CQ96DT6 458 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 KCNH3Q9ULD8 1083 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 ESYT2A0FGR8 921 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 PPP1R12BO60237 982 aaPredicted RBP16.76■□□□□ 0.27
BRAT1-201ENST00000340611 MAP3K9P80192 1104 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 GALNT17Q6IS24 598 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 LDHDQ86WU2 507 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 BAG1Q99933 345 aaPredicted RBP16.76■□□□□ 0.27
BRAT1-201ENST00000340611 NMRK2Q9NPI5 230 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 ARHGAP6O43182 974 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 CPP00450 1065 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 MRPL12P52815 198 aaKnown RBP16.76■□□□□ 0.27
BRAT1-201ENST00000340611 HOOK2Q96ED9 719 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 PURBQ96QR8 312 aaKnown RBP16.76■□□□□ 0.27
BRAT1-201ENST00000340611 SLF1Q9BQI6 1058 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 TUBE1Q9UJT0 475 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 CEP131Q9UPN4 1083 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 PPP2R3BQ9Y5P8 575 aa16.76■□□□□ 0.27
BRAT1-201ENST00000340611 ZNF536O15090 1300 aa16.75■□□□□ 0.27
BRAT1-201ENST00000340611 CLK2P49760 499 aaKnown RBP16.75■□□□□ 0.27
BRAT1-201ENST00000340611 TREML2Q5T2D2 321 aa16.75■□□□□ 0.27
BRAT1-201ENST00000340611 N4BP2L2Q92802 583 aaPredicted RBP16.75■□□□□ 0.27
BRAT1-201ENST00000340611 RANBP17Q9H2T7 1088 aaKnown RBP16.75■□□□□ 0.27
BRAT1-201ENST00000340611 FEM1BQ9UK73 627 aa16.75■□□□□ 0.27
BRAT1-201ENST00000340611 MRFAP1Q9Y605 127 aa16.75■□□□□ 0.27
BRAT1-201ENST00000340611 WDR46O15213 610 aaKnown RBP16.75■□□□□ 0.27
BRAT1-201ENST00000340611 ALAS1P13196 640 aa16.75■□□□□ 0.27
BRAT1-201ENST00000340611 CCPG1Q9ULG6 757 aa16.75■□□□□ 0.27
BRAT1-201ENST00000340611 AFG3L2Q9Y4W6 797 aa16.75■□□□□ 0.27
BRAT1-201ENST00000340611 NFIBO00712 420 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 MTF1Q14872 753 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 KIRREL3Q8IZU9 778 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 CYP2W1Q8TAV3 490 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 FAM204AQ9H8W3 233 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 SERTAD1Q9UHV2 236 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 HPSEQ9Y251 543 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 TXKP42681 527 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 HSP90B2PQ58FF3 399 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 TRMT44Q8IYL2 757 aaKnown RBP16.74■□□□□ 0.27
BRAT1-201ENST00000340611 MIEF2Q96C03 454 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 ANO3Q9BYT9 981 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 CD248Q9HCU0 757 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 RIPK3Q9Y572 518 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 PCDHA5Q9Y5H7 936 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 CSADQ9Y600 493 aa16.74■□□□□ 0.27
BRAT1-201ENST00000340611 hCG_1984214I3L0E3 225 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
BRAT1-201ENST00000340611 SOCS7O14512 581 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 TECP42680 631 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 TRAPPC10P48553 1259 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 RSRC2Q7L4I2 434 aaKnown RBP16.73■□□□□ 0.27
BRAT1-201ENST00000340611 ZNF713Q8N859 430 aaPredicted RBP16.73■□□□□ 0.27
BRAT1-201ENST00000340611 WDR18Q9BV38 432 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 PUF60Q9UHX1 559 aaKnown RBP16.73■□□□□ 0.27
BRAT1-201ENST00000340611 COL11A1P12107 1806 aaPredicted RBP16.73■□□□□ 0.27
BRAT1-201ENST00000340611 IQCA1LA6NCM1 817 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 PPFIA4O75335 1185 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 BMP6P22004 513 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 CCT5P48643 541 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 LPAR1Q92633 364 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 AS3MTQ9HBK9 375 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 SETQ01105 290 aaPredicted RBP16.73■□□□□ 0.27
BRAT1-201ENST00000340611 SYNPO2Q9UMS6 1093 aa16.73■□□□□ 0.27
BRAT1-201ENST00000340611 A0A0U1RQJ8 604 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 PPP1R18Q6NYC8 613 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 GADL1Q6ZQY3 521 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 FAM160B2Q86V87 743 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 TC2NQ8N9U0 490 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 ATRIPQ8WXE1 791 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 LZTFL1Q9NQ48 299 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 AFMP43652 599 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 GOLGA1Q92805 767 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 FAXDC2Q96IV6 333 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 MRPL44Q9H9J2 332 aaKnown RBP16.72■□□□□ 0.27
BRAT1-201ENST00000340611 PPP1R9AQ9ULJ8 1098 aa16.72■□□□□ 0.27
BRAT1-201ENST00000340611 SCN4AP35499 1836 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 RPS6KA5O75582 802 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 IREB2P48200 963 aaKnown RBP16.71■□□□□ 0.27
BRAT1-201ENST00000340611 PLS1Q14651 629 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 POTEMA6NI47 508 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 MAP2K7O14733 419 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 TFRCP02786 760 aaKnown RBP16.71■□□□□ 0.27
BRAT1-201ENST00000340611 ELF1P32519 619 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 USP8P40818 1118 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 DTHD1Q6ZMT9 781 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 RABGGTAQ92696 567 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 COL20A1Q9P218 1284 aa16.71■□□□□ 0.27
BRAT1-201ENST00000340611 PTPRFP10586 1907 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms