RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 SMC3Q9UQE7 1217 aa16.18■□□□□ 0.18
CTSL-201ENST00000340342 COLQQ9Y215 455 aaPredicted RBP16.18■□□□□ 0.18
CTSL-201ENST00000340342 TELO2Q9Y4R8 837 aa16.18■□□□□ 0.18
CTSL-201ENST00000340342 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.18■□□□□ 0.18
CTSL-201ENST00000340342 MROH7Q68CQ1 1323 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 IGLV3-22A0A075B6J6 115 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 A0A0U1RQG5 324 aaPredicted RBP16.17■□□□□ 0.18
CTSL-201ENST00000340342 CCDC194A0A1B0GVG4 234 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 MEIS1O00470 390 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 KCNA2P16389 499 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 SYN1P17600 705 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 CDK7P50613 346 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 TLE2Q04725 743 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 CXCL17Q6UXB2 119 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 CYFIP1Q7L576 1253 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 POLR3EQ9NVU0 708 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 SCN10AQ9Y5Y9 1956 aa16.17■□□□□ 0.18
CTSL-201ENST00000340342 DCDC2CA8MYV0 355 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 ARVCFO00192 962 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 TDP2O95551 362 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 BMP8BP34820 402 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 SP4Q02446 784 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 HSDL1Q3SXM5 330 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 PRR16Q569H4 304 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 PLA2G4DQ86XP0 818 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 HSCBQ8IWL3 235 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 EMID1Q96A84 441 aaPredicted RBP16.16■□□□□ 0.18
CTSL-201ENST00000340342 CDHR1Q96JP9 859 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 SPATA33Q96N06 139 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 GDF15Q99988 308 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 PRO3102Q9H379 93 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 MLXIPQ9HAP2 919 aa16.16■□□□□ 0.18
CTSL-201ENST00000340342 WDR81Q562E7 1941 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 MMP3P08254 477 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 MYL3P08590 195 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 CIITAP33076 1130 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 USP11P51784 963 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 LAMC2Q13753 1193 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 NEDD9Q14511 834 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 NIPA1Q7RTP0 329 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 PPTC7Q8NI37 304 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 LENG9Q96B70 501 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 SENP7Q9BQF6 1050 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 AGO4Q9HCK5 861 aaKnown RBP16.15■□□□□ 0.18
CTSL-201ENST00000340342 KIF3AQ9Y496 699 aa16.15■□□□□ 0.18
CTSL-201ENST00000340342 PQBP1O60828 265 aaKnown RBP16.14■□□□□ 0.17
CTSL-201ENST00000340342 CLTBP09497 229 aa16.14■□□□□ 0.17
CTSL-201ENST00000340342 PURAQ00577 322 aaKnown RBP16.14■□□□□ 0.17
CTSL-201ENST00000340342 ITGB3BPQ13352 177 aaPredicted RBP16.14■□□□□ 0.17
CTSL-201ENST00000340342 ITGA7Q13683 1181 aa16.14■□□□□ 0.17
CTSL-201ENST00000340342 SAFBQ15424 915 aaKnown RBP eCLIP16.14■□□□□ 0.17
CTSL-201ENST00000340342 LETM2Q2VYF4 491 aa16.14■□□□□ 0.17
CTSL-201ENST00000340342 HABP4Q5JVS0 413 aaKnown RBP16.14■□□□□ 0.17
CTSL-201ENST00000340342 METTL7BQ6UX53 244 aa16.14■□□□□ 0.17
CTSL-201ENST00000340342 SLC43A3Q8NBI5 491 aa16.14■□□□□ 0.17
CTSL-201ENST00000340342 PPP1R13LQ8WUF5 828 aa16.14■□□□□ 0.17
CTSL-201ENST00000340342 LBHD1Q9BQE6 289 aaPredicted RBP16.14■□□□□ 0.17
CTSL-201ENST00000340342 RANBP2P49792 3224 aaKnown RBP16.14■□□□□ 0.17
CTSL-201ENST00000340342 A0A1W2PPC1 479 aa16.13■□□□□ 0.17
CTSL-201ENST00000340342 KIF28PB7ZC32 967 aa16.13■□□□□ 0.17
CTSL-201ENST00000340342 MAFGO15525 162 aa16.13■□□□□ 0.17
CTSL-201ENST00000340342 ZNF286BP0CG31 522 aa16.13■□□□□ 0.17
CTSL-201ENST00000340342 MAGEA10P43363 369 aaPredicted RBP16.13■□□□□ 0.17
CTSL-201ENST00000340342 PSMC6P62333 389 aa16.13■□□□□ 0.17
CTSL-201ENST00000340342 SETQ01105 290 aaPredicted RBP16.13■□□□□ 0.17
CTSL-201ENST00000340342 FAAP100Q0VG06 881 aa16.13■□□□□ 0.17
CTSL-201ENST00000340342 NEK8Q86SG6 692 aa16.13■□□□□ 0.17
CTSL-201ENST00000340342 GJA10Q969M2 543 aa16.13■□□□□ 0.17
CTSL-201ENST00000340342 MTG1Q9BT17 334 aaPredicted RBP16.13■□□□□ 0.17
CTSL-201ENST00000340342 PDLIM7Q9NR12 457 aa16.13■□□□□ 0.17
CTSL-201ENST00000340342 LAMA2P24043 3122 aaKnown RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 DDX39AO00148 427 aaKnown RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 IPO5O00410 1097 aaKnown RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 NOP56O00567 594 aaKnown RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 WNT7AO00755 349 aa16.12■□□□□ 0.17
CTSL-201ENST00000340342 KIAA0355O15063 1070 aa16.12■□□□□ 0.17
CTSL-201ENST00000340342 SLC37A4O43826 429 aa16.12■□□□□ 0.17
CTSL-201ENST00000340342 DGKDQ16760 1214 aa16.12■□□□□ 0.17
CTSL-201ENST00000340342 GIMAP8Q8ND71 665 aaPredicted RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 GPR20Q99678 358 aa16.12■□□□□ 0.17
CTSL-201ENST00000340342 ZNF577Q9BSK1 485 aa16.12■□□□□ 0.17
CTSL-201ENST00000340342 FOXP1Q9H334 677 aaPredicted RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 JPH1Q9HDC5 661 aaPredicted RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 PRDM5Q9NQX1 630 aaPredicted RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 TMEM39AQ9NV64 488 aa16.12■□□□□ 0.17
CTSL-201ENST00000340342 TRIP12Q14669 1992 aaPredicted RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 GRIN2DO15399 1336 aa16.12■□□□□ 0.17
CTSL-201ENST00000340342 MYH9P35579 1960 aaKnown RBP16.12■□□□□ 0.17
CTSL-201ENST00000340342 CYP3A7-CYP3A51PA0A087WV96 503 aa16.11■□□□□ 0.17
CTSL-201ENST00000340342 TRIM43BA6NCK2 446 aa16.11■□□□□ 0.17
CTSL-201ENST00000340342 TLR3O15455 904 aaKnown RBP16.11■□□□□ 0.17
CTSL-201ENST00000340342 MSH4O15457 936 aa16.11■□□□□ 0.17
CTSL-201ENST00000340342 CCNT1O60563 726 aaKnown RBP16.11■□□□□ 0.17
CTSL-201ENST00000340342 PPFIA4O75335 1185 aa16.11■□□□□ 0.17
CTSL-201ENST00000340342 HOXD8P13378 290 aaPredicted RBP16.11■□□□□ 0.17
CTSL-201ENST00000340342 CYP3A7P24462 503 aa16.11■□□□□ 0.17
CTSL-201ENST00000340342 CHMP4BP1P59074 171 aa16.11■□□□□ 0.17
CTSL-201ENST00000340342 GNL2Q13823 731 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms