RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 BLIDQ8IZY5 108 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 C7orf31Q8N865 590 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 GDF15Q99988 308 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 BRMS1Q9HCU9 246 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 SH2B1Q9NRF2 756 aaPredicted RBP12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 TCEAL9Q9UHQ7 104 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 LAMA3Q16787 3333 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 MEIS1O00470 390 aa12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 CYP3A4P08684 503 aa12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 HOXD8P13378 290 aaPredicted RBP12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 PSEN2P49810 448 aa12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 SETQ01105 290 aaPredicted RBP12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 DAGLBQ8NCG7 672 aa12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 ALG1Q9BT22 464 aa12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 PRO3102Q9H379 93 aa12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 KCNH7Q9NS40 1196 aa12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 ZNF215Q9UL58 517 aaPredicted RBP12.89□□□□□ -0.35
SLC28A1-202ENST00000338602 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 UNC80Q8N2C7 3258 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 TRIM43BA6NCK2 446 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 F2P00734 622 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 TIMP1P01033 207 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 CD4P01730 458 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 KCNA2P16389 499 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 USP11P51784 963 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 SP4Q02446 784 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 MFSD10Q14728 455 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 KIAA0753Q2KHM9 967 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 KRT25Q7Z3Z0 450 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 SH3RF1Q7Z6J0 888 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 SESTD1Q86VW0 696 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 PLA2G4DQ86XP0 818 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 RASGRP4Q8TDF6 673 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 SEPT1Q8WYJ6 367 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 BADQ92934 168 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 TRIM43Q96BQ3 446 aaPredicted RBP12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 KIF2CQ99661 725 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 GPR20Q99678 358 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 LLPHQ9BRT6 129 aaKnown RBP12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 TRPV6Q9H1D0 765 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 PKD2L1Q9P0L9 805 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 TBX21Q9UL17 535 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 NFASCO94856 1347 aa12.88□□□□□ -0.35
SLC28A1-202ENST00000338602 CCDC194A0A1B0GVG4 234 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 H3BRB1 525 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 B4GALT4O60513 344 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 ATP9AO75110 1047 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 LARGE1O95461 756 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 CTDNEP1O95476 244 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 ZNF286BP0CG31 522 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 MCM2P49736 904 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 NONOQ15233 471 aaKnown RBP eCLIP12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 UTP14CQ5TAP6 766 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 CCDC155Q8N6L0 562 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 NSUN7Q8NE18 718 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 KAT2BQ92831 832 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 TNPO1Q92973 898 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 AIFM3Q96NN9 605 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 PHF20Q9BVI0 1012 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 HIPK3Q9H422 1215 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 TUT1Q9H6E5 874 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 AGO4Q9HCK5 861 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 JPH1Q9HDC5 661 aaPredicted RBP12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 TBC1D22BQ9NU19 505 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 SLC9A2Q9UBY0 812 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 MYH7BA7E2Y1 1941 aa12.87□□□□□ -0.35
SLC28A1-202ENST00000338602 HAS3O00219 553 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 SOX1O00570 391 aaPredicted RBP12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 LGALS2P05162 132 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 ARP10275 920 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 GNAT1P11488 350 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 CIITAP33076 1130 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 HMGN5P82970 282 aaKnown RBP12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 FPGSQ05932 587 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 PTGISQ16647 500 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 PRR16Q569H4 304 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 MFSD5Q6N075 450 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 FAM184AQ8NB25 1140 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 RETREG2Q8NC44 543 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 CYP2W1Q8TAV3 490 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 TBCKQ8TEA7 893 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 CRYGNQ8WXF5 182 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 TBC1D32Q96NH3 1257 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 NAP1L4Q99733 375 aaKnown RBP12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 ZNF577Q9BSK1 485 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 PPP1R12CQ9BZL4 782 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 AZI2Q9H6S1 392 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 TRMT13Q9NUP7 481 aaKnown RBP12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 KCNJ14Q9UNX9 436 aa12.86□□□□□ -0.35
SLC28A1-202ENST00000338602 SCN10AQ9Y5Y9 1956 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 FAM86B1E9PN63 330 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 IPO5O00410 1097 aaKnown RBP12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 FAM86B2P0C5J1 330 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 KRT2P35908 639 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms