RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 RASSF10A6NK89 507 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 C21orf2O43822 256 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 MED24O75448 989 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 GCNT3O95395 438 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 PDIA5Q14554 519 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 NFRKBQ6P4R8 1299 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 FAM133AQ8N9E0 248 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 CCDC17Q96LX7 622 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 ALS2CR12Q96Q35 445 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 NT5C3AQ9H0P0 336 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 DNAJC18Q9H819 358 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 SEPT11Q9NVA2 429 aaKnown RBP10.74□□□□□ -0.69
MSL3-202ENST00000337339 CAPN6Q9Y6Q1 641 aa10.74□□□□□ -0.69
MSL3-202ENST00000337339 POTEB2H3BUK9 544 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 KIF20AO95235 890 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 NDUFB10O96000 172 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 PPP1R2P41236 205 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 ECE1P42892 770 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 CTTNQ14247 550 aaKnown RBP10.73□□□□□ -0.69
MSL3-202ENST00000337339 RETREG2Q8NC44 543 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 TBC1D5Q92609 795 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 BCAS3Q9H6U6 928 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 TMOD2Q9NZR1 351 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 MYO1AQ9UBC5 1043 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 SPATA31A6Q5VVP1 1343 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 CETN3O15182 167 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 TBCAO75347 108 aaKnown RBP10.73□□□□□ -0.69
MSL3-202ENST00000337339 ACTN1P12814 892 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 VAV2P52735 878 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 CASP8Q14790 479 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 PODNQ7Z5L7 613 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 ERMNQ8TAM6 284 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 PRMT6Q96LA8 375 aaPredicted RBP10.73□□□□□ -0.69
MSL3-202ENST00000337339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.73□□□□□ -0.69
MSL3-202ENST00000337339 PACSIN2Q9UNF0 486 aaPredicted RBP10.73□□□□□ -0.69
MSL3-202ENST00000337339 BCS1LQ9Y276 419 aa10.73□□□□□ -0.69
MSL3-202ENST00000337339 H3BQF6 201 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 ZNF263O14978 683 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 EDIL3O43854 480 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 FTCDO95954 541 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 SMARCA1P28370 1054 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 NT5C2P49902 561 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 LRRC63Q05C16 580 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 SLC9C1Q4G0N8 1177 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 SFMBT2Q5VUG0 894 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 SH2D3AQ9BRG2 576 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 GBP3Q9H0R5 595 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 RABEP2Q9H5N1 569 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 FAN1Q9Y2M0 1017 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
MSL3-202ENST00000337339 RSPH10B2B2RC85 870 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 EIF3CLB5ME19 914 aaKnown RBP10.72□□□□□ -0.69
MSL3-202ENST00000337339 hCG_1984214I3L0E3 225 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 RSPH10BP0C881 870 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 BMP3P12645 472 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 KLHL30Q0D2K2 578 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 PPP4R3AQ6IN85 833 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 CATSPER3Q86XQ3 398 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 KSR1Q8IVT5 923 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 CCDC170Q8IYT3 715 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 CPXCR1Q8N123 301 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 ZNF713Q8N859 430 aaPredicted RBP10.72□□□□□ -0.69
MSL3-202ENST00000337339 COG1Q8WTW3 980 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 RIN2Q8WYP3 895 aaPredicted RBP10.72□□□□□ -0.69
MSL3-202ENST00000337339 EIF3CQ99613 913 aaKnown RBP10.72□□□□□ -0.69
MSL3-202ENST00000337339 HOMER2Q9NSB8 354 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 TMCO5BA8MYB1 307 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 ZBTB39O15060 712 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 CLSTN1O94985 981 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 PAFAH1B1P43034 410 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 DNAJC21Q5F1R6 531 aaKnown RBP10.72□□□□□ -0.69
MSL3-202ENST00000337339 BEND6Q5SZJ8 279 aaPredicted RBP10.72□□□□□ -0.69
MSL3-202ENST00000337339 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 HAUS3Q68CZ6 603 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 HHIPL2Q6UWX4 724 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 SFR1Q86XK3 245 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 IKZF4Q9H2S9 585 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 FAM198AQ9UFP1 575 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 SAMM50Q9Y512 469 aa10.72□□□□□ -0.69
MSL3-202ENST00000337339 A0A1B0GUL6 1792 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 CCDC66A2RUB6 948 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 CAPN2P17655 700 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 CASP5P51878 434 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 CKAP4Q07065 602 aaKnown RBP10.71□□□□□ -0.69
MSL3-202ENST00000337339 KIAA0753Q2KHM9 967 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 SYDE2Q5VT97 1194 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 MYCT1Q8N699 235 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 IFT81Q8WYA0 676 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 ERGIC2Q96RQ1 377 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 DHX36Q9H2U1 1008 aaKnown RBP10.71□□□□□ -0.69
MSL3-202ENST00000337339 GOLPH3Q9H4A6 298 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 PLAGL2Q9UPG8 496 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 FAM86B1E9PN63 330 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 PDE2AO00408 941 aaPredicted RBP10.71□□□□□ -0.69
MSL3-202ENST00000337339 FAM86B2P0C5J1 330 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 SNHG28P0DPA3 235 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 GCFC2P16383 781 aaKnown RBP10.71□□□□□ -0.69
MSL3-202ENST00000337339 EZH2Q15910 746 aaKnown RBP10.71□□□□□ -0.69
MSL3-202ENST00000337339 TRIM58Q8NG06 486 aa10.71□□□□□ -0.69
MSL3-202ENST00000337339 ACER1Q8TDN7 264 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms