RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 C6orf50Q9HD87 102 aa9.58□□□□□ -0.88
PACRG-201ENST00000337019 RIC8AQ9NPQ8 531 aa9.58□□□□□ -0.88
PACRG-201ENST00000337019 BARHL2Q9NY43 387 aa9.58□□□□□ -0.88
PACRG-201ENST00000337019 R3HCC1Q9Y3T6 440 aaKnown RBP9.58□□□□□ -0.88
PACRG-201ENST00000337019 SMCO2A6NFE2 343 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 STXBP3O00186 592 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 MEIS2O14770 477 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 KIAA0355O15063 1070 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 PTMAP06454 111 aaKnown RBP9.57□□□□□ -0.88
PACRG-201ENST00000337019 UBA1P22314 1058 aaKnown RBP9.57□□□□□ -0.88
PACRG-201ENST00000337019 GNA11P29992 359 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 ADD1P35611 737 aaKnown RBP9.57□□□□□ -0.88
PACRG-201ENST00000337019 CCT2P78371 535 aaKnown RBP9.57□□□□□ -0.88
PACRG-201ENST00000337019 FPGSQ05932 587 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 ARHGAP1Q07960 439 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 SSRP1Q08945 709 aaKnown RBP9.57□□□□□ -0.88
PACRG-201ENST00000337019 FAAP100Q0VG06 881 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 PFKFB3Q16875 520 aaPredicted RBP9.57□□□□□ -0.88
PACRG-201ENST00000337019 TMEM63BQ5T3F8 832 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 FAM126BQ8IXS8 530 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 TMEM199Q8N511 208 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 CCDC155Q8N6L0 562 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 BICD2Q8TD16 824 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 BADQ92934 168 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 EMID1Q96A84 441 aaPredicted RBP9.57□□□□□ -0.88
PACRG-201ENST00000337019 RNF26Q9BY78 433 aaPredicted RBP9.57□□□□□ -0.88
PACRG-201ENST00000337019 PPP1R12CQ9BZL4 782 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 RTEL1Q9NZ71 1219 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 DDX41Q9UJV9 622 aaKnown RBP9.57□□□□□ -0.88
PACRG-201ENST00000337019 PCDHA6Q9UN73 950 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 PCDHA8Q9Y5H6 950 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 SMCHD1A6NHR9 2005 aa9.57□□□□□ -0.88
PACRG-201ENST00000337019 TRIM43BA6NCK2 446 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 PRPF3O43395 683 aaKnown RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 SORBS3O60504 671 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 ZSCAN22P10073 491 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 PDIA3P30101 505 aaKnown RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 ZNF76P36508 570 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 CDK7P50613 346 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 UBE2HP62256 183 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 STK3Q13188 491 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 PPIGQ13427 754 aaKnown RBP eCLIP9.56□□□□□ -0.88
PACRG-201ENST00000337019 CELF3Q5SZQ8 465 aaKnown RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 NFRKBQ6P4R8 1299 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 SH3RF1Q7Z6J0 888 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 C7orf31Q8N865 590 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 TRIM43Q96BQ3 446 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 GPRASP2Q96D09 838 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 ZNF274Q96GC6 653 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 ZSCAN31Q96LW9 406 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 INPP4AQ96PE3 977 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 ALDH8A1Q9H2A2 487 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 HIPK3Q9H422 1215 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 TCEAL9Q9UHQ7 104 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 ZNF215Q9UL58 517 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 LIMCH1Q9UPQ0 1083 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 B4GALT4O60513 344 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 TIMP1P01033 207 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 TPM3P06753 285 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 IFNAR1P17181 557 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 XBP1P17861 261 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 ICAM3P32942 547 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 PTPN11Q06124 597 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 FUT2Q10981 343 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 MTMR1Q13613 665 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 TOB2Q14106 344 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 NBPF20Q3BBV1 942 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 FOXD4L5Q5VV16 416 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 METTL7BQ6UX53 244 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 REXO1Q8N1G1 1221 aaKnown RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 SLC43A3Q8NBI5 491 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 FOXD4L4Q8WXT5 416 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 PHKBQ93100 1093 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 ZFP91Q96JP5 570 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 ANO3Q9BYT9 981 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 MTIF3Q9H2K0 278 aaKnown RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 PRO3102Q9H379 93 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 NCOA5Q9HCD5 579 aaKnown RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
PACRG-201ENST00000337019 TBX21Q9UL17 535 aa9.56□□□□□ -0.88
PACRG-201ENST00000337019 UQCRHLA0A096LP55 91 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 ESYT2A0FGR8 921 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 PPFIA4O75335 1185 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 DEXIO95424 95 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 UQCRHP07919 91 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 ZNF286BP0CG31 522 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 PSEN2P49810 448 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 FXR1P51114 621 aaKnown RBP eCLIP9.55□□□□□ -0.88
PACRG-201ENST00000337019 EVCP57679 992 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 NLRP5P59047 1200 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 MRPS9P82933 396 aaKnown RBP9.55□□□□□ -0.88
PACRG-201ENST00000337019 SP4Q02446 784 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 BFSP2Q13515 415 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 MFSD10Q14728 455 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 MYSM1Q5VVJ2 828 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 MFSD5Q6N075 450 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 PSRC1Q6PGN9 363 aaPredicted RBP9.55□□□□□ -0.88
PACRG-201ENST00000337019 CYFIP1Q7L576 1253 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 RETREG2Q8NC44 543 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 RNPC3Q96LT9 517 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms