RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 YEATS4O95619 227 aa19.79■□□□□ 0.76
CHGA-202ENST00000334654 AKR1A1P14550 325 aa19.79■□□□□ 0.76
CHGA-202ENST00000334654 PRPHP41219 470 aa19.79■□□□□ 0.76
CHGA-202ENST00000334654 SPIRE1Q08AE8 756 aa19.79■□□□□ 0.76
CHGA-202ENST00000334654 CELF3Q5SZQ8 465 aaKnown RBP19.79■□□□□ 0.76
CHGA-202ENST00000334654 RIT2Q99578 217 aa19.79■□□□□ 0.76
CHGA-202ENST00000334654 VAV3Q9UKW4 847 aa19.79■□□□□ 0.76
CHGA-202ENST00000334654 CFAP45Q9UL16 551 aa19.79■□□□□ 0.76
CHGA-202ENST00000334654 FARP2O94887 1054 aaPredicted RBP19.78■□□□□ 0.76
CHGA-202ENST00000334654 GGPS1O95749 300 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 BMP15O95972 392 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 TXKP42681 527 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 ARHGAP1Q07960 439 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 NEDD9Q14511 834 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 MTFR1Q15390 333 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 CYFIP1Q7L576 1253 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 SLFN12Q8IYM2 578 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 ARMC5Q96C12 935 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 UNC93B1Q9H1C4 597 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 HMX1Q9NP08 348 aaPredicted RBP19.78■□□□□ 0.76
CHGA-202ENST00000334654 TBC1D22BQ9NU19 505 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 CEP131Q9UPN4 1083 aa19.78■□□□□ 0.76
CHGA-202ENST00000334654 WDR81Q562E7 1941 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 NKRFO15226 690 aaKnown RBP eCLIP19.77■□□□□ 0.76
CHGA-202ENST00000334654 SORBS3O60504 671 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 CCNE2O96020 404 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 CNGA1P29973 690 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 KRT85P78386 507 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 GRIN1Q05586 938 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 LRCH2Q5VUJ6 765 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 ARL6IP4Q66PJ3 421 aaKnown RBP19.77■□□□□ 0.76
CHGA-202ENST00000334654 CLEC17AQ6ZS10 378 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 ZNF333Q96JL9 665 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 MCOLN1Q9GZU1 580 aa19.77■□□□□ 0.76
CHGA-202ENST00000334654 TTC12Q9H892 705 aaPredicted RBP19.77■□□□□ 0.76
CHGA-202ENST00000334654 SPTLC2O15270 562 aa19.76■□□□□ 0.75
CHGA-202ENST00000334654 DUSP11O75319 330 aaKnown RBP19.76■□□□□ 0.75
CHGA-202ENST00000334654 BAG4O95429 457 aaKnown RBP19.76■□□□□ 0.75
CHGA-202ENST00000334654 GH1P01241 217 aa19.76■□□□□ 0.75
CHGA-202ENST00000334654 MARCKSP29966 332 aaPredicted RBP19.76■□□□□ 0.75
CHGA-202ENST00000334654 IRX5P78411 483 aaPredicted RBP19.76■□□□□ 0.75
CHGA-202ENST00000334654 LHX8Q68G74 356 aa19.76■□□□□ 0.75
CHGA-202ENST00000334654 METTL7BQ6UX53 244 aa19.76■□□□□ 0.75
CHGA-202ENST00000334654 DHX37Q8IY37 1157 aaKnown RBP19.76■□□□□ 0.75
CHGA-202ENST00000334654 GIMAP8Q8ND71 665 aaPredicted RBP19.76■□□□□ 0.75
CHGA-202ENST00000334654 LEO1Q8WVC0 666 aaPredicted RBP19.76■□□□□ 0.75
CHGA-202ENST00000334654 EMID1Q96A84 441 aaPredicted RBP19.76■□□□□ 0.75
CHGA-202ENST00000334654 FBXO2Q9UK22 296 aaPredicted RBP19.76■□□□□ 0.75
CHGA-202ENST00000334654 PCDHA12Q9UN75 941 aa19.76■□□□□ 0.75
CHGA-202ENST00000334654 Q9Y3F1 56 aa19.76■□□□□ 0.75
CHGA-202ENST00000334654 FRMPD3Q5JV73 1810 aa19.76■□□□□ 0.75
CHGA-202ENST00000334654 CTAGE5O15320 804 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 GAS7O60861 476 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 NCLP19338 710 aaKnown RBP19.75■□□□□ 0.75
CHGA-202ENST00000334654 FXR2P51116 673 aaKnown RBP eCLIP19.75■□□□□ 0.75
CHGA-202ENST00000334654 PPP2R5CQ13362 524 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 STK38Q15208 465 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 HSDL1Q3SXM5 330 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 SDF4Q9BRK5 362 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 TEKT3Q9BXF9 490 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.75■□□□□ 0.75
CHGA-202ENST00000334654 UNC45AQ9H3U1 944 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 GDPD2Q9HCC8 539 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 PAK6Q9NQU5 681 aaPredicted RBP19.75■□□□□ 0.75
CHGA-202ENST00000334654 SLC9A2Q9UBY0 812 aa19.75■□□□□ 0.75
CHGA-202ENST00000334654 DDX20Q9UHI6 824 aaKnown RBP19.75■□□□□ 0.75
CHGA-202ENST00000334654 SRPRBQ9Y5M8 271 aaKnown RBP19.75■□□□□ 0.75
CHGA-202ENST00000334654 DDX39AO00148 427 aaKnown RBP19.74■□□□□ 0.75
CHGA-202ENST00000334654 EML1O00423 815 aa19.74■□□□□ 0.75
CHGA-202ENST00000334654 DYNC1LI2O43237 492 aaPredicted RBP19.74■□□□□ 0.75
CHGA-202ENST00000334654 PPP6R2O75170 966 aa19.74■□□□□ 0.75
CHGA-202ENST00000334654 CCL5P13501 91 aa19.74■□□□□ 0.75
CHGA-202ENST00000334654 TECP42680 631 aa19.74■□□□□ 0.75
CHGA-202ENST00000334654 NKX3-2P78367 333 aa19.74■□□□□ 0.75
CHGA-202ENST00000334654 LAMC2Q13753 1193 aa19.74■□□□□ 0.75
CHGA-202ENST00000334654 IGSF22Q8N9C0 903 aa19.74■□□□□ 0.75
CHGA-202ENST00000334654 UPF3AQ9H1J1 476 aaKnown RBP19.74■□□□□ 0.75
CHGA-202ENST00000334654 MLXIPQ9HAP2 919 aa19.74■□□□□ 0.75
CHGA-202ENST00000334654 JPH1Q9HDC5 661 aaPredicted RBP19.74■□□□□ 0.75
CHGA-202ENST00000334654 GSTTP1A0A1W2PQM5 241 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 MARCH6O60337 910 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 ATG7O95352 703 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 GJA9P57773 515 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 PDIA5Q14554 519 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 AXDND1Q5T1B0 1012 aaPredicted RBP19.73■□□□□ 0.75
CHGA-202ENST00000334654 DTHD1Q6ZMT9 781 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 TLK2Q86UE8 772 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 SPATA32Q96LK8 384 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 CLIC6Q96NY7 704 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 GPR20Q99678 358 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 SCAND2PQ9GZW5 306 aaPredicted RBP19.73■□□□□ 0.75
CHGA-202ENST00000334654 VWA3AA6NCI4 1184 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 POTEMA6NI47 508 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 ADAMTS4O75173 837 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 ACTR2P61160 394 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 KRT76Q01546 638 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 ZNF746Q6NUN9 644 aaPredicted RBP19.73■□□□□ 0.75
CHGA-202ENST00000334654 ABHD15Q6UXT9 468 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 OR6J1Q8NGC5 347 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 KCNG4Q8TDN1 519 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms