RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 KCNMB3Q9NPA1 279 aa25.85■■□□□ 1.73
NDEL1-201ENST00000334527 PCDHA2Q9Y5H9 948 aa25.85■■□□□ 1.73
NDEL1-201ENST00000334527 EEF2P13639 858 aaKnown RBP25.84■■□□□ 1.73
NDEL1-201ENST00000334527 SLC1A4P43007 532 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 USP11P51784 963 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 RAD51AP2Q09MP3 1159 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 SHROOM1Q2M3G4 852 aaPredicted RBP25.84■■□□□ 1.73
NDEL1-201ENST00000334527 TDRD12Q587J7 1177 aaKnown RBP25.84■■□□□ 1.73
NDEL1-201ENST00000334527 HERC4Q5GLZ8 1057 aaPredicted RBP25.84■■□□□ 1.73
NDEL1-201ENST00000334527 MED4Q9NPJ6 270 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 CEP72Q9P209 647 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 PHACTR2O75167 634 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 STAT3P40763 770 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 CRKP46108 304 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 MAPK8IP2Q13387 824 aaPredicted RBP25.84■■□□□ 1.73
NDEL1-201ENST00000334527 CDC37Q16543 378 aaPredicted RBP25.84■■□□□ 1.73
NDEL1-201ENST00000334527 HGSNATQ68CP4 663 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 ANKRD13CQ8N6S4 541 aa25.84■■□□□ 1.73
NDEL1-201ENST00000334527 AFF2P51816 1311 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 SSU72P8A0A1W2PR75 194 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 PJA2O43164 708 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 PRLRP16471 622 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 CACNB3P54284 484 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 TCP10Q12799 353 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 LSM14BQ9BX40 385 aaKnown RBP25.83■■□□□ 1.73
NDEL1-201ENST00000334527 SALL4Q9UJQ4 1053 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 NOL4O94818 638 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 CYP11B2P19099 503 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 RASSF7Q02833 373 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 SLFN13Q68D06 897 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 NFRKBQ6P4R8 1299 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 ARHGAP27Q6ZUM4 889 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 GSPT2Q8IYD1 628 aaKnown RBP25.83■■□□□ 1.73
NDEL1-201ENST00000334527 DCAF4Q8WV16 495 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 OSBPL9Q96SU4 736 aa25.83■■□□□ 1.73
NDEL1-201ENST00000334527 MYH10P35580 1976 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 MED24O75448 989 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 GNA14O95837 355 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 FAM83BQ5T0W9 1011 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 CCDC70Q6NSX1 233 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 CCNI2Q6ZMN8 369 aaPredicted RBP25.82■■□□□ 1.72
NDEL1-201ENST00000334527 SCFD1Q8WVM8 642 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 HPCAL4Q9UM19 191 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 HYOU1Q9Y4L1 999 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.82■■□□□ 1.72
NDEL1-201ENST00000334527 CYP3A7-CYP3A51PA0A087WV96 503 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 KRT18P05783 430 aaKnown RBP25.82■■□□□ 1.72
NDEL1-201ENST00000334527 MYBL2P10244 700 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 NPR1P16066 1061 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 CYP3A7P24462 503 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 SFMBT2Q5VUG0 894 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 TRIM59Q8IWR1 403 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 MMGT1Q8N4V1 131 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 GDAP1L1Q96MZ0 367 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 PSMB7Q99436 277 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 CRACR2AQ9BSW2 395 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 NUCKS1Q9H1E3 243 aaKnown RBP25.82■■□□□ 1.72
NDEL1-201ENST00000334527 KCTD10Q9H3F6 313 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 EMILIN3Q9NT22 766 aa25.82■■□□□ 1.72
NDEL1-201ENST00000334527 TCP1P17987 556 aaKnown RBP25.81■■□□□ 1.72
NDEL1-201ENST00000334527 AARSP49588 968 aaKnown RBP eCLIP25.81■■□□□ 1.72
NDEL1-201ENST00000334527 CERKLQ49MI3 558 aaPredicted RBP25.81■■□□□ 1.72
NDEL1-201ENST00000334527 SLC9C1Q4G0N8 1177 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 ZNF572Q7Z3I7 529 aaPredicted RBP25.81■■□□□ 1.72
NDEL1-201ENST00000334527 SLFN12Q8IYM2 578 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 ZHX3Q9H4I2 956 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 KANSL2Q9H9L4 492 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 POTEFA5A3E0 1075 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 POTEIP0CG38 1075 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 CXCR5P32302 372 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 POLR2FP61218 127 aaKnown RBP25.81■■□□□ 1.72
NDEL1-201ENST00000334527 POTEGQ6S5H5 508 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 POTEEQ6S8J3 1075 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 MKL1Q969V6 931 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 PCDHAC2Q9Y5I4 1007 aa25.81■■□□□ 1.72
NDEL1-201ENST00000334527 MEIS2O14770 477 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 SLC26A4O43511 780 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 TLR2O60603 784 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 SERPING1P05155 500 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 MARSP56192 900 aaKnown RBP25.8■■□□□ 1.72
NDEL1-201ENST00000334527 ZSCAN26Q16670 478 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 SYN2Q92777 582 aaPredicted RBP25.8■■□□□ 1.72
NDEL1-201ENST00000334527 ZDHHC15Q96MV8 337 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 MBOAT7Q96N66 472 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 KCNQ5Q9NR82 932 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 NYAP2Q9P242 653 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 SIPA1L1O43166 1804 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 DDTLA6NHG4 134 aaPredicted RBP25.8■■□□□ 1.72
NDEL1-201ENST00000334527 RBAK-RBAKDNI3L0D1 243 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 NCK2O43639 380 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 SLC12A3P55017 1021 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 ITIH3Q06033 890 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 ARSHQ5FYA8 562 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 SPATA4Q8NEY3 305 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 NOX5Q96PH1 765 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 SELENOOQ9BVL4 669 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 DBNDD1Q9H9R9 158 aa25.8■■□□□ 1.72
NDEL1-201ENST00000334527 BUB1O43683 1085 aa25.79■■□□□ 1.72
NDEL1-201ENST00000334527 ARHGAP4P98171 946 aa25.79■■□□□ 1.72
NDEL1-201ENST00000334527 APBA1Q02410 837 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms