RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 SLFN13Q68D06 897 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 NCAPH2Q6IBW4 605 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 STYK1Q6J9G0 422 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 MMGT1Q8N4V1 131 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 ETNPPLQ8TBG4 499 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 HPS3Q969F9 1004 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 FAM20AQ96MK3 541 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 AMNQ9BXJ7 453 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 IFIH1Q9BYX4 1025 aaKnown RBP11.89□□□□□ -0.51
CCDC172-201ENST00000333254 KCTD10Q9H3F6 313 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 ZSWIM4Q9H7M6 989 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 MED4Q9NPJ6 270 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 SNX12Q9UMY4 172 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 PCDHA13Q9Y5I0 950 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 PCDHA1Q9Y5I3 950 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 F8W031 263 aaPredicted RBP11.88□□□□□ -0.51
CCDC172-201ENST00000333254 MPHOSPH10O00566 681 aaKnown RBP11.88□□□□□ -0.51
CCDC172-201ENST00000333254 MARCH6O60337 910 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 CLSTN1O94985 981 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 ANXA13P27216 316 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 EIF4A3P38919 411 aaKnown RBP11.88□□□□□ -0.51
CCDC172-201ENST00000333254 AARSP49588 968 aaKnown RBP eCLIP11.88□□□□□ -0.51
CCDC172-201ENST00000333254 SCNN1DP51172 638 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 SLC12A3P55017 1021 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 KCNMA1Q12791 1236 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 BMT2Q1RMZ1 405 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 HGSNATQ68CP4 663 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 KCTD1Q719H9 257 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 C2CD5Q86YS7 1000 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 ALS2CR12Q96Q35 445 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 RNF14Q9UBS8 474 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 TRAF3IP3Q9Y228 551 aa11.88□□□□□ -0.51
CCDC172-201ENST00000333254 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 G3V3G9 751 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 PIK3CDO00329 1044 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 SERPING1P05155 500 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 MUTP22033 750 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 RPA1P27694 616 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 SLC16A2P36021 539 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 ARHGAP4P98171 946 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 CASP8Q14790 479 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 CCDC70Q6NSX1 233 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 GPBP1Q86WP2 473 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 FAM71BQ8TC56 605 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 MMS19Q96T76 1030 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 MMRN2Q9H8L6 949 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 TNS1Q9HBL0 1735 aaKnown RBP11.87□□□□□ -0.51
CCDC172-201ENST00000333254 BTNL10A8MVZ5 291 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 TRAF5O00463 557 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 EPHB6O15197 1021 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 NKRFO15226 690 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC172-201ENST00000333254 AKR1B10O60218 316 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 RHOXF2BP0C7M4 288 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 ICA1Q05084 483 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 SLC9C1Q4G0N8 1177 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 CCDC40Q4G0X9 1142 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 EPM2AIP1Q7L775 607 aaPredicted RBP11.87□□□□□ -0.51
CCDC172-201ENST00000333254 CACNA2D4Q7Z3S7 1137 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 FRMD5Q7Z6J6 570 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 SIAH1Q8IUQ4 282 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 SYT2Q8N9I0 419 aaPredicted RBP11.87□□□□□ -0.51
CCDC172-201ENST00000333254 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 RHOXF2Q9BQY4 288 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 POLR3CQ9BUI4 534 aaPredicted RBP11.87□□□□□ -0.51
CCDC172-201ENST00000333254 DEF6Q9H4E7 631 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 PLCB1Q9NQ66 1216 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 FAM207AQ9NSI2 230 aaPredicted RBP11.87□□□□□ -0.51
CCDC172-201ENST00000333254 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 AIPL1Q9NZN9 384 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 FBXL5Q9UKA1 691 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
CCDC172-201ENST00000333254 KIAA1024Q9UPX6 916 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 HYOU1Q9Y4L1 999 aa11.87□□□□□ -0.51
CCDC172-201ENST00000333254 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 POTECB2RU33 542 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L15C9J2P7 530 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L13C9JLJ4 530 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L11C9JVI0 530 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L18D6R9N7 530 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L22D6RA61 530 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L17D6RBQ6 530 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L19D6RCP7 530 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L20D6RJB6 530 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 E9PMD0 336 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 PDXKO00764 312 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 NOL4O94818 638 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 TRIM37O94972 964 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 TNFRSF8P28908 595 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 MAGEA1P43355 309 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L24Q0WX57 530 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 SLC15A2Q16348 729 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 NFIL3Q16649 462 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 C10orf76Q5T2E6 689 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 SYDE2Q5VT97 1194 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 CC2D2BQ6DHV5 1058 aa11.86□□□□□ -0.51
CCDC172-201ENST00000333254 USP17L6PQ6QN14 398 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms