RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 DYNC1LI2O43237 492 aaPredicted RBP18.18■□□□□ 0.5
LRRC28-202ENST00000331450 BRD1O95696 1058 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 HOXD8P13378 290 aaPredicted RBP18.18■□□□□ 0.5
LRRC28-202ENST00000331450 MNX1P50219 401 aaPredicted RBP18.18■□□□□ 0.5
LRRC28-202ENST00000331450 LAMC2Q13753 1193 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 NBR1Q14596 966 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 LRRC41Q15345 812 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 CCSAPQ6IQ19 270 aaPredicted RBP18.18■□□□□ 0.5
LRRC28-202ENST00000331450 METTL7BQ6UX53 244 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 DHX37Q8IY37 1157 aaKnown RBP18.18■□□□□ 0.5
LRRC28-202ENST00000331450 ZNF577Q9BSK1 485 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.18■□□□□ 0.5
LRRC28-202ENST00000331450 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 PCDHB6Q9Y5E3 794 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 BRCA2P51587 3418 aa18.18■□□□□ 0.5
LRRC28-202ENST00000331450 SCN10AQ9Y5Y9 1956 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 NEMFO60524 1076 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 PSMD10O75832 226 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 F13A1P00488 732 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 C6orf222P0C671 652 aaPredicted RBP18.17■□□□□ 0.5
LRRC28-202ENST00000331450 ATP2B1P20020 1258 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 MCM7P33993 719 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 HSDL1Q3SXM5 330 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 CYFIP1Q7L576 1253 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 PPTC7Q8NI37 304 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 HAS1Q92839 578 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 RIT2Q99578 217 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 AP5M1Q9H0R1 490 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 TBC1D22BQ9NU19 505 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 TELO2Q9Y4R8 837 aa18.17■□□□□ 0.5
LRRC28-202ENST00000331450 DNM1LO00429 736 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 SORBS3O60504 671 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 MMP3P08254 477 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 CPT1AP50416 773 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 BEX3Q00994 111 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 FSCN1Q16658 493 aaKnown RBP18.16■□□□□ 0.5
LRRC28-202ENST00000331450 B3GNT9Q6UX72 402 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 RNF180Q86T96 592 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 C4orf32Q8N8J7 132 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 ANKLE1Q8NAG6 615 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 ARRDC4Q8NCT1 418 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 AFG1LQ8WV93 481 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 GJA10Q969M2 543 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 FAM20AQ96MK3 541 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 MTMR9Q96QG7 549 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 SDF4Q9BRK5 362 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 TMEM60Q9H2L4 133 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 MLXIPQ9HAP2 919 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 SPC25Q9HBM1 224 aa18.16■□□□□ 0.5
LRRC28-202ENST00000331450 JPH1Q9HDC5 661 aaPredicted RBP18.16■□□□□ 0.5
LRRC28-202ENST00000331450 KIAA0100Q14667 2235 aaKnown RBP18.15■□□□□ 0.5
LRRC28-202ENST00000331450 CCNE2O96020 404 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 ZNF174Q15697 407 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 CALCRLQ16602 461 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 LRCH2Q5VUJ6 765 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 FAM173BQ6P4H8 233 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 SPATA33Q96N06 139 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 UIMC1Q96RL1 719 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 GPR20Q99678 358 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 SLC9A2Q9UBY0 812 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 ALPK3Q96L96 1907 aa18.15■□□□□ 0.5
LRRC28-202ENST00000331450 MYH9P35579 1960 aaKnown RBP18.15■□□□□ 0.5
LRRC28-202ENST00000331450 TCHHQ07283 1943 aa18.14■□□□□ 0.49
LRRC28-202ENST00000331450 GAS7O60861 476 aa18.14■□□□□ 0.49
LRRC28-202ENST00000331450 TFRCP02786 760 aaKnown RBP18.14■□□□□ 0.49
LRRC28-202ENST00000331450 SPIRE1Q08AE8 756 aa18.14■□□□□ 0.49
LRRC28-202ENST00000331450 GNASQ5JWF2 1037 aa18.14■□□□□ 0.49
LRRC28-202ENST00000331450 TSEN34Q9BSV6 310 aaKnown RBP18.14■□□□□ 0.49
LRRC28-202ENST00000331450 TEKT3Q9BXF9 490 aa18.14■□□□□ 0.49
LRRC28-202ENST00000331450 VAV3Q9UKW4 847 aa18.14■□□□□ 0.49
LRRC28-202ENST00000331450 ELP1O95163 1332 aa18.14■□□□□ 0.49
LRRC28-202ENST00000331450 GSTTP1A0A1W2PQM5 241 aa18.13■□□□□ 0.49
LRRC28-202ENST00000331450 DDX39AO00148 427 aaKnown RBP18.13■□□□□ 0.49
LRRC28-202ENST00000331450 ATG7O95352 703 aa18.13■□□□□ 0.49
LRRC28-202ENST00000331450 OR52Z1P0C646 297 aa18.13■□□□□ 0.49
LRRC28-202ENST00000331450 EN2P19622 333 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-202ENST00000331450 ATP2C1P98194 919 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-202ENST00000331450 KRT76Q01546 638 aa18.13■□□□□ 0.49
LRRC28-202ENST00000331450 KCNA10Q16322 511 aa18.13■□□□□ 0.49
LRRC28-202ENST00000331450 FOXD4L5Q5VV16 416 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-202ENST00000331450 ZNF746Q6NUN9 644 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-202ENST00000331450 UBE2Q1Q7Z7E8 422 aa18.13■□□□□ 0.49
LRRC28-202ENST00000331450 SLFN12Q8IYM2 578 aa18.13■□□□□ 0.49
LRRC28-202ENST00000331450 PCSK9Q8NBP7 692 aaKnown RBP18.13■□□□□ 0.49
LRRC28-202ENST00000331450 FOXD4L4Q8WXT5 416 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-202ENST00000331450 DAXXQ9UER7 740 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-202ENST00000331450 PHF24Q9UPV7 400 aa18.13■□□□□ 0.49
LRRC28-202ENST00000331450 ARID2Q68CP9 1835 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 MOXD2PA6NHM9 499 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 CCDC85CA6NKD9 419 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 KBTBD13C9JR72 458 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 LAD1O00515 517 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 NOP56O00567 594 aaKnown RBP18.12■□□□□ 0.49
LRRC28-202ENST00000331450 PPFIA4O75335 1185 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 ASGR1P07306 291 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 COL6A1P12109 1028 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 ACLYP53396 1101 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 SOX10P56693 466 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 ACTR2P61160 394 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 PURAQ00577 322 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms