RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 TMEM67Q5HYA8 995 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 NUGGCQ68CJ6 796 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 DPY19L2Q6NUT2 758 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 BTNL9Q6UXG8 535 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 ANKRD23Q86SG2 305 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 TRIM74Q86UV6 250 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 TRIM73Q86UV7 250 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 CABLES1Q8TDN4 633 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 FBF1Q8TES7 1133 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 IP6K1Q92551 441 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 MAGOHBQ96A72 148 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 KRT12Q99456 494 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 EPAS1Q99814 870 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 CABP5Q9NP86 173 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 VPS54Q9P1Q0 977 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 ARHGAP20Q9P2F6 1191 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 CNOT7Q9UIV1 285 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 SLC4A7Q9Y6M7 1214 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 EYA2O00167 538 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 RAD51CO43502 376 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 AKR1B10O60218 316 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 FGFR1OPO95684 399 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 AGTP01019 485 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 CCNE1P24864 410 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 NLRP5P59047 1200 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 CYP27A1Q02318 531 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 KLC1Q07866 573 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 SFSWAPQ12872 951 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 MKRN3Q13064 507 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 UBE3CQ15386 1083 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 CLUL1Q15846 466 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 SPDYAQ5MJ70 313 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 IRGCQ6NXR0 463 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 ANKRD13DQ6ZTN6 518 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 COL23A1Q86Y22 540 aaPredicted RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 ENDOVQ8N8Q3 282 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 MLXIPQ9HAP2 919 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 TFR2Q9UP52 801 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 GMEB1Q9Y692 573 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 SPATA31A3Q5VYP0 1347 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 CAMTA1Q9Y6Y1 1673 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 DPPA5A6NC42 116 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 DCAF8L1A6NGE4 600 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 F8VZ95 297 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 SNX3O60493 162 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 SUN1O94901 812 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 TSNAXIP1Q2TAA8 658 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 TMC3Q7Z5M5 1100 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 KLHL29Q96CT2 875 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 TRIM47Q96LD4 638 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 TMEM237Q96Q45 408 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 MYD88Q99836 296 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 PHF20Q9BVI0 1012 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 TXLNGYQ9BZA5 131 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 TRIM4Q9C037 500 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 DMAP1Q9NPF5 467 aaPredicted RBP9.17□□□□□ -0.94
SKA2-201ENST00000330137 ANAPC4Q9UJX5 808 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 LTN1O94822 1766 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 GJB6O95452 261 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 MMEP08473 750 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 CALB2P22676 271 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 ARID4AP29374 1257 aaPredicted RBP9.17□□□□□ -0.94
SKA2-201ENST00000330137 ERVK-9P63128 1117 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 SNX1Q13596 522 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 HLTFQ14527 1009 aaKnown RBP eCLIP9.17□□□□□ -0.94
SKA2-201ENST00000330137 C1orf141Q5JVX7 400 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 ANO7Q6IWH7 933 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 PPP1R14BQ96C90 147 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 ECT2Q9H8V3 914 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 RXFP1Q9HBX9 757 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 ADAM22Q9P0K1 906 aa9.17□□□□□ -0.94
SKA2-201ENST00000330137 USP15Q9Y4E8 981 aaPredicted RBP9.17□□□□□ -0.94
SKA2-201ENST00000330137 TNS3Q68CZ2 1445 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 POTEFA5A3E0 1075 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 EVI5O60447 810 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 POTEJP0CG39 1038 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 EIF4A3P38919 411 aaKnown RBP9.16□□□□□ -0.94
SKA2-201ENST00000330137 DIXDC1Q155Q3 683 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 KRT71Q3SY84 523 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 MIIPQ5JXC2 388 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 C6orf118Q5T5N4 469 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 DZIP3Q86Y13 1208 aaKnown RBP9.16□□□□□ -0.94
SKA2-201ENST00000330137 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.16□□□□□ -0.94
SKA2-201ENST00000330137 STAG2Q8N3U4 1231 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 TAF4BQ92750 862 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 GRAMD1AQ96CP6 724 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 RNPEPL1Q9HAU8 725 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 SIK3Q9Y2K2 1263 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 MROH7Q68CQ1 1323 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 MYH7BA7E2Y1 1941 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 CREB3O43889 395 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 ANXA13P27216 316 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 FOXO4P98177 505 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 ACVR2BQ13705 512 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 SETDB1Q15047 1291 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 ZNF530Q6P9A1 599 aaPredicted RBP9.16□□□□□ -0.94
SKA2-201ENST00000330137 TAOK1Q7L7X3 1001 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms