RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ERCC4Q92889 916 aaPredicted RBP21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 GJD2Q9UKL4 321 aa21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 EIF3JO75822 258 aaKnown RBP21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 TECP42680 631 aa21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 SEMA3FQ13275 785 aa21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 USP49Q70CQ1 688 aa21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 MORC4Q8TE76 937 aa21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 SLC5A5Q92911 643 aa21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 MAML3Q96JK9 1138 aa21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 BPIFA3Q9BQP9 254 aa21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 TTC12Q9H892 705 aaPredicted RBP21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 SAGE1Q9NXZ1 904 aa21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 PKD2L1Q9P0L9 805 aa21.09■□□□□ 0.97
EXOSC3-201ENST00000327304 ASB14A6NK59 587 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 B4DLN1 442 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 ACTN4O43707 911 aaKnown RBP21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 STAM2O75886 525 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 ZNF467Q7Z7K2 595 aaPredicted RBP21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 NLRX1Q86UT6 975 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 SLFN12Q8IYM2 578 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 GPRASP2Q96D09 838 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 EPSTI1Q96J88 318 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 FAM20AQ96MK3 541 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 MPHOSPH6Q99547 160 aaKnown RBP21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 NUDT12Q9BQG2 462 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 ZNF577Q9BSK1 485 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 AGO4Q9HCK5 861 aaKnown RBP21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 SERTAD1Q9UHV2 236 aa21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 DIS3Q9Y2L1 958 aaKnown RBP21.08■□□□□ 0.97
EXOSC3-201ENST00000327304 LOC102724159A0A0B4J2E5 919 aa21.08■□□□□ 0.96
EXOSC3-201ENST00000327304 GPR25O00155 361 aa21.08■□□□□ 0.96
EXOSC3-201ENST00000327304 FXR2P51116 673 aaKnown RBP eCLIP21.08■□□□□ 0.96
EXOSC3-201ENST00000327304 PWP2Q15269 919 aaKnown RBP21.08■□□□□ 0.96
EXOSC3-201ENST00000327304 ARMCX2Q7L311 632 aa21.08■□□□□ 0.96
EXOSC3-201ENST00000327304 EEPD1Q7L9B9 569 aa21.08■□□□□ 0.96
EXOSC3-201ENST00000327304 SOCS4Q8WXH5 440 aa21.08■□□□□ 0.96
EXOSC3-201ENST00000327304 CEP350Q5VT06 3117 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 KIAA1217Q5T5P2 1943 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 PP2D1A8MPX8 630 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 IPO5O00410 1097 aaKnown RBP21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 ADCY5O95622 1261 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 HOXC6P09630 235 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 PNOCQ13519 176 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 POSTNQ15063 836 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 SEPT14Q6ZU15 432 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 SLC5A4Q9NY91 659 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 PCDHA12Q9UN75 941 aa21.07■□□□□ 0.96
EXOSC3-201ENST00000327304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 POTEMA6NI47 508 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 SLFN14P0C7P3 912 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 CYP2B6P20813 491 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 RGS2P41220 211 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 ITGB3BPQ13352 177 aaPredicted RBP21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 TMEM266Q2M3C6 531 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 GNPTABQ3T906 1256 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 NT5DC1Q5TFE4 455 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 FBXO16Q8IX29 292 aaPredicted RBP21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 IGSF22Q8N9C0 903 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 CD99L2Q8TCZ2 262 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 VAV3Q9UKW4 847 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 GOLGA6L19H0YKK7 550 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 ATP9AO75110 1047 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 PSMD10O75832 226 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 CDC25AP30304 524 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 MAP2K1Q02750 393 aaPredicted RBP21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 SPIRE1Q08AE8 756 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 KIF22Q14807 665 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 LRCH2Q5VUJ6 765 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 MAMDC4Q6UXC1 1216 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 DNAJC5GQ8N7S2 189 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 PDILTQ8N807 584 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 FLRT1Q9NZU1 646 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 TSKSQ9UJT2 592 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 GABRQQ9UN88 632 aa21.06■□□□□ 0.96
EXOSC3-201ENST00000327304 SPATA31C2B4DYI2 1134 aa21.05■□□□□ 0.96
EXOSC3-201ENST00000327304 TXLNAP40222 546 aa21.05■□□□□ 0.96
EXOSC3-201ENST00000327304 CCL14Q16627 93 aa21.05■□□□□ 0.96
EXOSC3-201ENST00000327304 DPCR1Q3MIW9 517 aa21.05■□□□□ 0.96
EXOSC3-201ENST00000327304 APBA2Q99767 749 aa21.05■□□□□ 0.96
EXOSC3-201ENST00000327304 TINF2Q9BSI4 451 aa21.05■□□□□ 0.96
EXOSC3-201ENST00000327304 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.05■□□□□ 0.96
EXOSC3-201ENST00000327304 PCDHA5Q9Y5H7 936 aa21.05■□□□□ 0.96
EXOSC3-201ENST00000327304 A0A087X0B3 334 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 BECN2A8MW95 431 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 DHX15O43143 795 aaKnown RBP21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 GAS7O60861 476 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 ICAM3P32942 547 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 SARSP49591 514 aaKnown RBP21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 SH3RF1Q7Z6J0 888 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 DHX40Q8IX18 779 aaKnown RBP21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 IQUBQ8NA54 791 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 DHX58Q96C10 678 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 CDHR1Q96JP9 859 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 AK8Q96MA6 479 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 RIT2Q99578 217 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 LRWD1Q9UFC0 647 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 DDX39AO00148 427 aaKnown RBP21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 SNAI1O95863 264 aaPredicted RBP21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 KCNA2P16389 499 aa21.04■□□□□ 0.96
EXOSC3-201ENST00000327304 PDIA5Q14554 519 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms