RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 DAAM1Q9Y4D1 1078 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 CHUKO15111 745 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 AARSP49588 968 aaKnown RBP eCLIP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 CARSP49589 748 aaKnown RBP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 DPP8Q6V1X1 898 aaPredicted RBP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 ANKRD62A6NC57 917 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 hCG_1984214I3L0E3 225 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 EXOC3O60645 756 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 PBX1P40424 430 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 PMS1P54277 932 aaKnown RBP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 PABPC4Q13310 644 aaKnown RBP eCLIP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 EZH2Q15910 746 aaKnown RBP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 PRR16Q569H4 304 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 ZNF713Q8N859 430 aaPredicted RBP13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 RAD54LQ92698 747 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 ASIC3Q9UHC3 531 aa13.93□□□□□ -0.18
DNMT3A-202ENST00000321117 RIMBP2O15034 1052 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 CLTAP09496 248 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 PLA2G4BP0C869 781 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 GCFC2P16383 781 aaKnown RBP13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 FERP16591 822 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 BIRC3Q13489 604 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 NEDD9Q14511 834 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 E2F5Q15329 346 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 MGARPQ8TDB4 240 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 CELF1Q92879 486 aaKnown RBP13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 ZC3H12CQ9C0D7 883 aaKnown RBP13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 HOMER3Q9NSC5 361 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 FMO2Q99518 471 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 INTS9Q9NV88 658 aaKnown RBP13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 ODF2LQ9ULJ1 636 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 IFNAR2P48551 515 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 CDK8P49336 464 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 SETDB1Q15047 1291 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 CEP63Q96MT8 703 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 EPN3Q9H201 632 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 KBTBD4Q9NVX7 518 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 TMEM260Q9NX78 707 aa13.92□□□□□ -0.18
DNMT3A-202ENST00000321117 GMNCA6NCL1 334 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 BCRP11274 1271 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 LSP1P33241 339 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 PLTPP55058 493 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 COASYQ13057 564 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 UBE2SQ16763 222 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 INTS8Q75QN2 995 aaKnown RBP13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 SLFN12Q8IYM2 578 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 RDH13Q8NBN7 331 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 DDX47Q9H0S4 455 aaKnown RBP13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 STK24Q9Y6E0 443 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 FIGNQ5HY92 759 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 VGLL2Q8N8G2 317 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 CCDC63Q8NA47 563 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 ARL8AQ96BM9 186 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 TRIM7Q9C029 511 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 CNOT10Q9H9A5 744 aaKnown RBP13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 KANSL2Q9H9L4 492 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 PLEKHG2Q9H7P9 1386 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 NALCNQ8IZF0 1738 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 GJC1P36383 396 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 MDH1P40925 334 aaKnown RBP13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 CYP2J2P51589 502 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 GSTA5Q7RTV2 222 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 CCT8L2Q96SF2 557 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 NFAT5O94916 1531 aa13.91□□□□□ -0.18
DNMT3A-202ENST00000321117 GFPT2O94808 682 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 PRLRP16471 622 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 LMNB1P20700 586 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 GUCY2CP25092 1073 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 USH1GQ495M9 461 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 TBC1D22AQ8WUA7 517 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 RIOK1Q9BRS2 568 aaKnown RBP13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 VEZTQ9HBM0 779 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 RGPD8O14715 1765 aaPredicted RBP13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 ATP11AP98196 1134 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 AMPD2Q01433 879 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 KCNH2Q12809 1159 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 ORC2Q13416 577 aaPredicted RBP13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 C12orf60Q5U649 245 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 TMED8Q6PL24 325 aaPredicted RBP13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 ANKRD42Q8N9B4 389 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 ZNF473Q8WTR7 871 aaKnown RBP13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 GCNT4Q9P109 453 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 MYMKA6NI61 221 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 RPS6KA5O75582 802 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 EIF3BP55884 814 aaKnown RBP13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 CDK17Q00537 523 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 SBK1Q52WX2 424 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 TCP11Q8WWU5 503 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 MAGOHBQ96A72 148 aaKnown RBP13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 TBC1D31Q96DN5 1066 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 LRRC37A3O60309 1634 aa13.9□□□□□ -0.18
DNMT3A-202ENST00000321117 TDP2O95551 362 aa13.9□□□□□ -0.19
DNMT3A-202ENST00000321117 CTNNA2P26232 953 aa13.9□□□□□ -0.19
DNMT3A-202ENST00000321117 SLC18A3Q16572 532 aa13.9□□□□□ -0.19
DNMT3A-202ENST00000321117 HIBCHQ6NVY1 386 aaPredicted RBP13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms