RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TAF3Q5VWG9 929 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 EXOC4Q96A65 974 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 PURBQ96QR8 312 aaKnown RBP19.26■□□□□ 0.67
COL9A1-201ENST00000320755 TAF1LQ8IZX4 1826 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 CCDC181Q5TID7 509 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 ANO9A1A5B4 782 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 GDF11O95390 407 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 PSMD2Q13200 908 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 PDXDC1Q6P996 788 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 ZNF662Q6ZS27 426 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 CREG2Q8IUH2 290 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.25■□□□□ 0.67
COL9A1-201ENST00000320755 HNRNPH3P31942 346 aaKnown RBP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 EPS15P42566 896 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 EHHADHQ08426 723 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 SLFN13Q68D06 897 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 CCDC65Q8IXS2 484 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 ALS2CR12Q96Q35 445 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 LRRC1Q9BTT6 524 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 ANO3Q9BYT9 981 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 PLIN4Q96Q06 1357 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 MED24O75448 989 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 RNASE9P60153 205 aaKnown RBP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 PSMC6P62333 389 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 PABPC4Q13310 644 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 RAPGEF1Q13905 1077 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 SEPT2Q15019 361 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 CDC37Q16543 378 aaPredicted RBP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 FAM83BQ5T0W9 1011 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 ZNF622Q969S3 477 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 ACBD3Q9H3P7 528 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 DNAJC18Q9H819 358 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 EMILIN3Q9NT22 766 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 DDTLA6NHG4 134 aaPredicted RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 CRKP46108 304 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 ADAM9Q13443 819 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 MAP9Q49MG5 647 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 CERKLQ49MI3 558 aaPredicted RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 MTMR8Q96EF0 704 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 OSBPL9Q96SU4 736 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 DMGDHQ9UI17 866 aaKnown RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 CYP4A11Q02928 519 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 MS4A14Q96JA4 679 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 NT5C3AQ9H0P0 336 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 FAM204AQ9H8W3 233 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 AFF2P51816 1311 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 MYH7BA7E2Y1 1941 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 SFMBT2Q5VUG0 894 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 PPP1R18Q6NYC8 613 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 SLC30A10Q6XR72 485 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 RPGRIP1Q96KN7 1286 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 TMX4Q9H1E5 349 aaPredicted RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 RNF40O75150 1001 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 CCDC70Q6NSX1 233 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 SCFD1Q8WVM8 642 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 TBC1D5Q92609 795 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 NHSQ6T4R5 1651 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 TLR2O60603 784 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 CYP11B2P19099 503 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 HOXA13P31271 388 aaPredicted RBP19.22■□□□□ 0.67
COL9A1-201ENST00000320755 SLC9C1Q4G0N8 1177 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 ZCWPW2Q504Y3 356 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 CCNI2Q6ZMN8 369 aaPredicted RBP19.22■□□□□ 0.67
COL9A1-201ENST00000320755 SPATA4Q8NEY3 305 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 SELENOOQ9BVL4 669 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 BCAS3Q9H6U6 928 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 FAM170AA1A519 330 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 NOL4O94818 638 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 GCFC2P16383 781 aaKnown RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 CASP5P51878 434 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 PTPROQ16827 1216 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 HGSNATQ68CP4 663 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 IQCEQ6IPM2 695 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 DNAAF5Q86Y56 855 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 FAM133AQ8N9E0 248 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 FAM71BQ8TC56 605 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 IQCDQ96DY2 449 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 P2RX7Q99572 595 aaKnown RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 ADAMTS1Q9UHI8 967 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 HPCAL4Q9UM19 191 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 ATF5Q9Y2D1 282 aaPredicted RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 ACTN1P12814 892 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 MCM3P25205 808 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 SPICE1Q8N0Z3 855 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 PROM2Q8N271 834 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 FTCDO95954 541 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 GGCXP38435 758 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 ARSHQ5FYA8 562 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 NOX5Q96PH1 765 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 PACSIN2Q9UNF0 486 aaPredicted RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 KDM3AQ9Y4C1 1321 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 ARHGAP4P98171 946 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 MSL1Q68DK7 614 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 SND1Q7KZF4 910 aaKnown RBP eCLIP19.2■□□□□ 0.66
COL9A1-201ENST00000320755 CATSPER3Q86XQ3 398 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 GOLGA6L1Q8N7Z2 621 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 CYP2W1Q8TAV3 490 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 HYOU1Q9Y4L1 999 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms