RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 SERPING1P05155 500 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.315e-7■■■□□ 16.9
FARP1-201ENST00000319562 CASP8Q14790 479 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 VPS39Q96JC1 886 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 SFMBT1Q9UHJ3 866 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 NOVA2Q9UNW9 492 aaKnown RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 DIS3Q9Y2L1 958 aaKnown RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 FAM95CA0A1B0GW59 222 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 WDR91A4D1P6 747 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 HMGB3O15347 200 aaKnown RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 ZMYND10O75800 440 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 TMCC1O94876 653 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 NR2F2P24468 414 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 NUGGCQ68CJ6 796 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 PATL1Q86TB9 770 aaKnown RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 TRIM45Q9H8W5 580 aaPredicted RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 NRBP2Q9NSY0 501 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 PPP6R2O75170 966 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 HSPA4LO95757 839 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 NPATQ14207 1427 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 A0A1W2PQ27 194 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 A0A1W2PQ64 194 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 A0A1W2PQD8 194 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 ATP5JP18859 108 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 CAPRIN1Q14444 709 aaKnown RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 DPP8Q6V1X1 898 aaPredicted RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 KRT37O76014 449 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 ICE2Q659A1 982 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 DNAJC24Q6P3W2 148 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 STX19Q8N4C7 294 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 SNX25Q9H3E2 840 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 NDE1Q9NXR1 346 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 ABCC12Q96J65 1359 aa13.08□□□□□ -0.31
FARP1-201ENST00000319562 ADCY1Q08828 1119 aa13.08□□□□□ -0.31
FARP1-201ENST00000319562 PCDHA7Q9UN72 937 aa13.08□□□□□ -0.31
FARP1-201ENST00000319562 SOX5P35711 763 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 RBL2Q08999 1139 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 ODR4Q5SWX8 454 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 ENAHQ8N8S7 591 aaPredicted RBP13.08□□□□□ -0.32
FARP1-201ENST00000319562 PHACTR3Q96KR7 559 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 KDM5AP29375 1690 aaKnown RBP13.08□□□□□ -0.32
FARP1-201ENST00000319562 GNPATO15228 680 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 OCM2P0CE71 109 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 OCMP0CE72 109 aaPredicted RBP13.08□□□□□ -0.32
FARP1-201ENST00000319562 HINFPQ9BQA5 517 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 KLC2Q9H0B6 622 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 TRPM2O94759 1503 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 KDM5BQ9UGL1 1544 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 HNRNPDLO14979 420 aaKnown RBP13.08□□□□□ -0.32
FARP1-201ENST00000319562 TRAPPC10P48553 1259 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 KIF22Q14807 665 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 METTL23Q86XA0 190 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 CATSPER1Q8NEC5 780 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 FRA10AC1Q70Z53 315 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 FANCBQ8NB91 859 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 TDRD7Q8NHU6 1098 aaKnown RBP13.08□□□□□ -0.32
FARP1-201ENST00000319562 SNX19Q92543 992 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 FBLN1P23142 703 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 SLCO1A2P46721 670 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 AARSP49588 968 aaKnown RBP eCLIP13.08□□□□□ -0.32
FARP1-201ENST00000319562 CARSP49589 748 aaKnown RBP13.08□□□□□ -0.32
FARP1-201ENST00000319562 TCP10Q12799 353 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 C1orf146Q5VVC0 180 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 KIF9Q9HAQ2 790 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 SLC4A7Q9Y6M7 1214 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 TJP3O95049 919 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 FKBP3Q00688 224 aaKnown RBP13.08□□□□□ -0.32
FARP1-201ENST00000319562 ARMC2Q8NEN0 867 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 GJA10Q969M2 543 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 GCNT4Q9P109 453 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 SLC8A2Q9UPR5 921 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 ZMYM3Q14202 1370 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 HSPD1P10809 573 aaKnown RBP13.08□□□□□ -0.32
FARP1-201ENST00000319562 ZNF790Q6PG37 636 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 MAPKAPK5Q8IW41 473 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 LMCD1Q9NZU5 365 aa13.08□□□□□ -0.32
FARP1-201ENST00000319562 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 TNFAIP1Q13829 316 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 FOXP1Q9H334 677 aaPredicted RBP13.07□□□□□ -0.32
FARP1-201ENST00000319562 H0Y626 953 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 PRPSAP2O60256 369 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 TRIM16O95361 564 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 ANKRD13CQ8N6S4 541 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 DTNBP1Q96EV8 351 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 PARD6BQ9BYG5 372 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 CXCR5P32302 372 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 TBC1D1Q86TI0 1168 aaPredicted RBP13.07□□□□□ -0.32
FARP1-201ENST00000319562 CALN1Q9BXU9 219 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 MMEP08473 750 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.07□□□□□ -0.32
FARP1-201ENST00000319562 PANX2Q96RD6 677 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 SH3GL3Q99963 347 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 TMEM206Q9H813 350 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 PPARGC1AQ9UBK2 798 aaKnown RBP13.07□□□□□ -0.32
FARP1-201ENST00000319562 KIAA1024Q9UPX6 916 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 PDHA1P08559 390 aa13.07□□□□□ -0.32
FARP1-201ENST00000319562 KRT33BQ14525 404 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 350.1 ms