RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SUFUQ9UMX1 484 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 GDAQ9Y2T3 454 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 NFE2L3Q9Y4A8 694 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 A0A087WUV0 522 aaPredicted RBP14.53□□□□□ -0.08
CPNE1-201ENST00000317677 PIK3CDO00329 1044 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 NRDCO43847 1150 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 ERCC5P28715 1186 aaPredicted RBP14.53□□□□□ -0.08
CPNE1-201ENST00000317677 PDIA5Q14554 519 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 FAM160B2Q86V87 743 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 RASSF8Q8NHQ8 419 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 HNRNPLLQ8WVV9 542 aaKnown RBP14.53□□□□□ -0.08
CPNE1-201ENST00000317677 KIAA1683Q9H0B3 1180 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 SAMSN1Q9NSI8 373 aaKnown RBP14.53□□□□□ -0.08
CPNE1-201ENST00000317677 GGA3Q9NZ52 723 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 DACH1Q9UI36 760 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 RBBP6Q7Z6E9 1792 aaKnown RBP14.52□□□□□ -0.08
CPNE1-201ENST00000317677 PAPPA2Q9BXP8 1791 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 FAM86B1E9PN63 330 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 COBLO75128 1261 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 FAM86B2P0C5J1 330 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 MAP2K2P36507 400 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 STX17P56962 302 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 BRD3Q15059 726 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 TMEM119Q4V9L6 283 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 KLHL10Q6JEL2 608 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.09
CPNE1-201ENST00000317677 MOXD1Q6UVY6 613 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 ANKRD20A12PQ8NF67 263 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 ETNPPLQ8TBG4 499 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 RABGGTAQ92696 567 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 EMILIN3Q9NT22 766 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 PASKQ96RG2 1323 aa14.52□□□□□ -0.09
CPNE1-201ENST00000317677 CCDC151A5D8V7 595 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 PTPN21Q16825 1174 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 ZNF658Q5TYW1 1059 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-201ENST00000317677 MAP1SQ66K74 1059 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-201ENST00000317677 DLK2Q6UY11 383 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 RSRC2Q7L4I2 434 aaKnown RBP14.51□□□□□ -0.09
CPNE1-201ENST00000317677 APTXQ7Z2E3 356 aaKnown RBP14.51□□□□□ -0.09
CPNE1-201ENST00000317677 APOBEC3FQ8IUX4 373 aaKnown RBP14.51□□□□□ -0.09
CPNE1-201ENST00000317677 EGFL6Q8IUX8 553 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 CYP2W1Q8TAV3 490 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 ZKSCAN4Q969J2 545 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-201ENST00000317677 TRIM9Q9C026 710 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 CUEDC2Q9H467 287 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 WDR46O15213 610 aaKnown RBP14.51□□□□□ -0.09
CPNE1-201ENST00000317677 ITGBL1O95965 494 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-201ENST00000317677 FOSP01100 380 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-201ENST00000317677 CIITAP33076 1130 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 SPIRE1Q08AE8 756 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 TMEM266Q2M3C6 531 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 TRIM65Q6PJ69 517 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 CNPY4Q8N129 248 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 SNX29Q8TEQ0 813 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 AGBL1Q96MI9 1066 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 GINM1Q9NU53 330 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 CTNND2Q9UQB3 1225 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 SYNRGQ9UMZ2 1314 aa14.51□□□□□ -0.09
CPNE1-201ENST00000317677 COL11A1P12107 1806 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-201ENST00000317677 SPDYE3A6NKU9 549 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 CFBP00751 764 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 STAT3P40763 770 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 MTMR2Q13614 643 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 MCM6Q14566 821 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 KCNB1Q14721 858 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 Q4G0T1 1027 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 FCHSD1Q86WN1 690 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 SCYL3Q8IZE3 742 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 CALML4Q96GE6 196 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 NAP1L4Q99733 375 aaKnown RBP14.5□□□□□ -0.09
CPNE1-201ENST00000317677 C7orf25Q9BPX7 421 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 MAGEF1Q9HAY2 307 aa14.5□□□□□ -0.09
CPNE1-201ENST00000317677 OTOFQ9HC10 1997 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 IGLV3-22A0A075B6J6 115 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 CCDC189A1A4V9 331 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 TMEM88BA6NKF7 163 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 H3BQF6 201 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 RHOBTB3O94955 611 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 CYP3A4P08684 503 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 VCAM1P19320 739 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 PRCPP42785 496 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 PRR16Q569H4 304 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 CDKAL1Q5VV42 579 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 SPATA1Q5VX52 437 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 LPAR1Q92633 364 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 WRNIP1Q96S55 665 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 SLF1Q9BQI6 1058 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 PCDHA12Q9UN75 941 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 MAPK8IP1Q9UQF2 711 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 MYMKA6NI61 221 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 MYL1P05976 194 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 PTPRAP18433 802 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 UBASH3AP57075 661 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 SPP2Q13103 211 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 HYIQ5T013 277 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 DCAF15Q66K64 600 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 TMC6Q7Z403 805 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 TADA2BQ86TJ2 420 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 CLEC4DQ8WXI8 215 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms