RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 O00370 1275 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 PRDM1O75626 825 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 PALMO75781 387 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 PLEKHA8P1O95397 391 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 ATP5DP30049 168 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 ADCY2Q08462 1091 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 PDIA5Q14554 519 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 NBPF20Q3BBV1 942 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 TBC1D5Q92609 795 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 ORAI2Q96SN7 254 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 PSMB7Q99436 277 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 AIPL1Q9NZN9 384 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 FBXL5Q9UKA1 691 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 TNS3Q68CZ2 1445 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 RAD51CO43502 376 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 MYO1EQ12965 1108 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 EDRF1Q3B7T1 1238 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 CMTR1Q8N1G2 835 aaKnown RBP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 CFAP61Q8NHU2 1237 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 FBF1Q8TES7 1133 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 SMCR8Q8TEV9 937 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 UBLCP1Q8WVY7 318 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 TRIM7Q9C029 511 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 SUCLA2Q9P2R7 463 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 RIC1Q4ADV7 1423 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 KRIT1O00522 736 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 KCNK3O14649 394 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 CETN3O15182 167 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 SUN1O94901 812 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 PLCG1P19174 1290 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 EPS15P42566 896 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 PMS1P54277 932 aaKnown RBP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 SH3BGRP55822 239 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 HGSNATQ68CP4 663 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 CAPRIN2Q6IMN6 1127 aaKnown RBP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 PEX26Q7Z412 305 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 LARP4BQ92615 738 aaKnown RBP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 TLCD1Q96CP7 247 aa5.23□□□□□ -1.57
PTPN13-201ENST00000316707 METTL14Q9HCE5 456 aaKnown RBP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPN13-201ENST00000316707 A0A0A6YYK5 440 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 PPIP5K2O43314 1243 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 FAM153BP0C7A2 387 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 KLRC1P26715 233 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 SMARCA1P28370 1054 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 ELF3P78545 371 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 UBE4AQ14139 1066 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 FAM153CQ494X1 144 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 SBK1Q52WX2 424 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 FAM26FQ5R3K3 315 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 NEK8Q86SG6 692 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 NSMCE1Q8WV22 266 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 RAPGEF5Q92565 580 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 INCENPQ9NQS7 918 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 INTS9Q9NV88 658 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 HAUS2Q9NVX0 235 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 TMOD3Q9NYL9 352 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 FAM153AQ9UHL3 310 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 TSPY2A6NKD2 308 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 H0YGN5 161 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 NCK2O43639 380 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 HIP1RO75146 1068 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 PPFIA2O75334 1257 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 ATP5HO75947 161 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 ASIC2Q16515 512 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 CCDC152Q4G0S7 254 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 LRRC55Q6ZSA7 311 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 LMNTD2Q8IXW0 634 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 DDX12PQ92771 950 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 VTI1AQ96AJ9 217 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 NT5C3AQ9H0P0 336 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 CARD9Q9H257 536 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 PABPC3Q9H361 631 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 CTNNAL1Q9UBT7 734 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 NFS1Q9Y697 457 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 MYO5BQ9ULV0 1848 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 RIMS1Q86UR5 1692 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 TRAF5O00463 557 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 RGS16O15492 202 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 MYCNP04198 464 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 DRD4P21917 467 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 CXCR5P32302 372 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 MAGOHP61326 146 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 ALKBH5Q6P6C2 394 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 MAGOHBQ96A72 148 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 TMX4Q9H1E5 349 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 CORO1CQ9ULV4 474 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 MIF4GDA9UHW6 222 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 F8VZ95 297 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 DNM1LO00429 736 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 BUB1O43683 1085 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 ATP6V1G2O95670 118 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 MMP13P45452 471 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 GRIK3Q13003 919 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 DHX34Q14147 1143 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 COL23A1Q86Y22 540 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 PIK3R5Q8WYR1 880 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 FMO2Q99518 471 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 ROPN1BQ9BZX4 212 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms