RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 PKD2L1Q9P0L9 805 aa17.62■□□□□ 0.41
CALR-201ENST00000316448 ASTN1O14525 1302 aa17.62■□□□□ 0.41
CALR-201ENST00000316448 POTEFA5A3E0 1075 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 COBLO75128 1261 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 MYL1P05976 194 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 BCRP11274 1271 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 ZNF18P17022 549 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 FSTL1Q12841 308 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 ITGB3BPQ13352 177 aaPredicted RBP17.61■□□□□ 0.41
CALR-201ENST00000316448 PPP2R5CQ13362 524 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 SNAPC2Q13487 334 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 POTEGQ6S5H5 508 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 FASTKD5Q7L8L6 764 aaKnown RBP17.61■□□□□ 0.41
CALR-201ENST00000316448 EIF2AK1Q9BQI3 630 aaKnown RBP17.61■□□□□ 0.41
CALR-201ENST00000316448 MOV10L1Q9BXT6 1211 aaKnown RBP17.61■□□□□ 0.41
CALR-201ENST00000316448 FANCLQ9NW38 375 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 RABGAP1Q9Y3P9 1069 aa17.61■□□□□ 0.41
CALR-201ENST00000316448 IPO5O00410 1097 aaKnown RBP17.6■□□□□ 0.41
CALR-201ENST00000316448 ATP9AO75110 1047 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 NR3C2P08235 984 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 RPA1P27694 616 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 CNTN2Q02246 1040 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 NIPA1Q7RTP0 329 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 VSIG10LQ86VR7 867 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 MB21D1Q8N884 522 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 CHST13Q8NET6 341 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 KIAA1524Q8TCG1 905 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 AGO4Q9HCK5 861 aaKnown RBP17.6■□□□□ 0.41
CALR-201ENST00000316448 PYCARDQ9ULZ3 195 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 UNCXA6NJT0 531 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 CHMP2AO43633 222 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 GAS7O60861 476 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 SLITRK3O94933 977 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 STX17P56962 302 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 SETQ01105 290 aaPredicted RBP17.6■□□□□ 0.41
CALR-201ENST00000316448 CYP4A11Q02928 519 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 SEMA3FQ13275 785 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 KCNB1Q14721 858 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 DYMQ7RTS9 669 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 HPS3Q969F9 1004 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 HSD17B14Q9BPX1 270 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 SPTLC3Q9NUV7 552 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 IMPACTQ9P2X3 320 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 NFE2L3Q9Y4A8 694 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 LCTP09848 1927 aa17.6■□□□□ 0.41
CALR-201ENST00000316448 DDX39AO00148 427 aaKnown RBP17.59■□□□□ 0.41
CALR-201ENST00000316448 RGS20O76081 388 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 RHOBTB3O94955 611 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 CYP2C8P10632 490 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 FKBP1BP68106 108 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 ZNF658Q5TYW1 1059 aaPredicted RBP17.59■□□□□ 0.41
CALR-201ENST00000316448 KLHL10Q6JEL2 608 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 BRI3BPQ8WY22 251 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 RMND1Q9NWS8 449 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 MAPK8IP1Q9UQF2 711 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 OFD1O75665 1012 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 PLA2G4BP0C869 781 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 PRCPP42785 496 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 ASIC1P78348 528 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 LRMPQ12912 555 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 CTTNQ14247 550 aaKnown RBP17.59■□□□□ 0.41
CALR-201ENST00000316448 NCAPG2Q86XI2 1143 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 C2orf69Q8N8R5 385 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 CACTINQ8WUQ7 758 aaKnown RBP17.59■□□□□ 0.41
CALR-201ENST00000316448 DNAJC19Q96DA6 116 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 DYDC2Q96IM9 177 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 POLR3CQ9BUI4 534 aaPredicted RBP17.59■□□□□ 0.41
CALR-201ENST00000316448 NT5C3AQ9H0P0 336 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 BCAS3Q9H6U6 928 aa17.59■□□□□ 0.41
CALR-201ENST00000316448 WRAP73Q9P2S5 460 aaPredicted RBP17.59■□□□□ 0.41
CALR-201ENST00000316448 SYNRGQ9UMZ2 1314 aa17.58■□□□□ 0.41
CALR-201ENST00000316448 KDM3AQ9Y4C1 1321 aa17.58■□□□□ 0.41
CALR-201ENST00000316448 NPHP3-ACAD11A0A0J9YXS1 232 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 BTBD19C9JJ37 291 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 ZBTB39O15060 712 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 SLC26A4O43511 780 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 FCER1AP12319 257 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 ERCC3P19447 782 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 OSBPP22059 807 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 ARSHQ5FYA8 562 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 NSUN6Q8TEA1 469 aaKnown RBP17.58■□□□□ 0.4
CALR-201ENST00000316448 DDX12PQ92771 950 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 RIT2Q99578 217 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 TEKT3Q9BXF9 490 aa17.58■□□□□ 0.4
CALR-201ENST00000316448 CBFA2T2O43439 604 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 SLC12A3P55017 1021 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 GSDMDP57764 484 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 AMPD3Q01432 767 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 STK4Q13043 487 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 MTMR1Q13613 665 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 HAUS3Q68CZ6 603 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 LRRC8AQ8IWT6 810 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 ANKRD35Q8N283 1001 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 GIMAP8Q8ND71 665 aaPredicted RBP17.57■□□□□ 0.4
CALR-201ENST00000316448 ERMNQ8TAM6 284 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 CCL15-CCL14A0A0B4J2E2 113 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 TESPA1A2RU30 521 aaPredicted RBP17.57■□□□□ 0.4
CALR-201ENST00000316448 SOWAHBA6NEL2 793 aa17.57■□□□□ 0.4
CALR-201ENST00000316448 SSBP05455 408 aaKnown RBP eCLIP17.57■□□□□ 0.4
CALR-201ENST00000316448 CYP11B2P19099 503 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms