RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CTAGE1Q96RT6 745 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 MAP3K14Q99558 947 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 LRFN3Q9BTN0 628 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 EPHX3Q9H6B9 360 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 MLXIPQ9HAP2 919 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 TAF6LQ9Y6J9 622 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 TRIP12Q14669 1992 aaPredicted RBP9.42□□□□□ -0.9
TPM3-203ENST00000312970 PRRC2BQ5JSZ5 2229 aaKnown RBP9.41□□□□□ -0.9
TPM3-203ENST00000312970 STAM2O75886 525 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 GGPS1O95749 300 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 F2P00734 622 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 CA3P07451 260 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 CKBP12277 381 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 HOXD8P13378 290 aaPredicted RBP9.41□□□□□ -0.9
TPM3-203ENST00000312970 SMARCA1P28370 1054 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 KCNJ6P48051 423 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 RBM25P49756 843 aaKnown RBP9.41□□□□□ -0.9
TPM3-203ENST00000312970 RBL2Q08999 1139 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 GPNMBQ14956 572 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 HSDL1Q3SXM5 330 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 LRRC8DQ7L1W4 858 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 HERC6Q8IVU3 1022 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 MB21D2Q8IYB1 491 aaPredicted RBP9.41□□□□□ -0.9
TPM3-203ENST00000312970 DHX38Q92620 1227 aaKnown RBP9.41□□□□□ -0.9
TPM3-203ENST00000312970 RRP36Q96EU6 259 aaKnown RBP9.41□□□□□ -0.9
TPM3-203ENST00000312970 LZTS2Q9BRK4 669 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 MTA3Q9BTC8 594 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 C1QTNF1Q9BXJ1 281 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 TSPYL2Q9H2G4 693 aaPredicted RBP9.41□□□□□ -0.9
TPM3-203ENST00000312970 RBM8AQ9Y5S9 174 aaKnown RBP9.41□□□□□ -0.9
TPM3-203ENST00000312970 BAZ2BQ9UIF8 2168 aaKnown RBP9.41□□□□□ -0.9
TPM3-203ENST00000312970 TRIOO75962 3097 aa9.41□□□□□ -0.9
TPM3-203ENST00000312970 SORBS3O60504 671 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 CXCL10P02778 98 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 ZNF286BP0CG31 522 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 POU3F3P20264 500 aaPredicted RBP9.4□□□□□ -0.9
TPM3-203ENST00000312970 KIF5BP33176 963 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 MCM5P33992 734 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 PSEN1P49768 467 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 GNAQP50148 359 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 ANTXR2P58335 489 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 MRPS9P82933 396 aaKnown RBP9.4□□□□□ -0.9
TPM3-203ENST00000312970 TFF2Q03403 129 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 GNPTABQ3T906 1256 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 CNKSR3Q6P9H4 555 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 CASC1Q6TDU7 716 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 ZNF654Q8IZM8 581 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 IL31RAQ8NI17 732 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 CTCFLQ8NI51 663 aaPredicted RBP9.4□□□□□ -0.9
TPM3-203ENST00000312970 PIBF1Q8WXW3 757 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 CUL5Q93034 780 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 C16orf70Q9BSU1 422 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 SPZ1Q9BXG8 430 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 LY9Q9HBG7 655 aa9.4□□□□□ -0.9
TPM3-203ENST00000312970 ABHD14A-ACY1A0A1B0GW23 586 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 CCDC69A6NI79 296 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 SPATA31C2B4DYI2 1134 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 H3BRB1 525 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 RFXAPO00287 272 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 NOP56O00567 594 aaKnown RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 PRC1O43663 620 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 TLL1O43897 1013 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 NBNO60934 754 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 EFCAB14O75071 495 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 DDAH1O94760 285 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 UBA1P22314 1058 aaKnown RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 ICAM3P32942 547 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 KCNQ1P51787 676 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 WDR5P61964 334 aaKnown RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 ZNF200P98182 395 aaPredicted RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 TAP1Q03518 808 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 IKBKEQ14164 716 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 NEDD9Q14511 834 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 TRIM71Q2Q1W2 868 aaKnown RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 ZNF618Q5T7W0 954 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 XRRA1Q6P2D8 792 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 NFXL1Q6ZNB6 911 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 TET1Q8NFU7 2136 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 SMARCC2Q8TAQ2 1214 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 GPKOWQ92917 476 aaPredicted RBP eCLIP9.39□□□□□ -0.911e-12■□□□□ 9.1
TPM3-203ENST00000312970 TMEM87BQ96K49 555 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 PCMTD1Q96MG8 357 aaPredicted RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 ZBED2Q9BTP6 218 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 USP26Q9BXU7 913 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 LSG1Q9H089 658 aaKnown RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 GZF1Q9H116 711 aaPredicted RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 TUT1Q9H6E5 874 aaKnown RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 BCAS3Q9H6U6 928 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 CERS4Q9HA82 394 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 RTEL1Q9NZ71 1219 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 SEC63Q9UGP8 760 aaKnown RBP9.39□□□□□ -0.91
TPM3-203ENST00000312970 PCDHB8Q9UN66 801 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 PTPRSQ13332 1948 aa9.39□□□□□ -0.91
TPM3-203ENST00000312970 BRWD1Q9NSI6 2320 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 C17orf102A2RUQ5 167 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 PIK3CDO00329 1044 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 MEIS2O14770 477 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 SLC27A2O14975 620 aa9.38□□□□□ -0.91
TPM3-203ENST00000312970 FIBPO43427 364 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms