RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 CELF3Q5SZQ8 465 aaKnown RBP14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 LINC00301Q8NCQ3 95 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 GIMAP8Q8ND71 665 aaPredicted RBP14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 COPS5Q92905 334 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 GJA10Q969M2 543 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 EMID1Q96A84 441 aaPredicted RBP14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 BCAS3Q9H6U6 928 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 HMX1Q9NP08 348 aaPredicted RBP14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 TBC1D22BQ9NU19 505 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 TFIP11Q9UBB9 837 aaKnown RBP14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 VAV3Q9UKW4 847 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 CEP131Q9UPN4 1083 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 Q9Y3F1 56 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 MCM3APO60318 1980 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 DUSP11O75319 330 aaKnown RBP14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 FARP2O94887 1054 aaPredicted RBP14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 YEATS4O95619 227 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 GGPS1O95749 300 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 NKX3-2P78367 333 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 SPIRE1Q08AE8 756 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 MTFR1Q15390 333 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 IL17AQ16552 155 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 GJC2Q5T442 439 aaPredicted RBP14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 METTL7BQ6UX53 244 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 SLFN12Q8IYM2 578 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 TNPO1Q92973 898 aaKnown RBP14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 LENG1Q96BZ8 264 aaPredicted RBP14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 UIMC1Q96RL1 719 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 UNC93B1Q9H1C4 597 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 PAK6Q9NQU5 681 aaPredicted RBP14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 PKD2L1Q9P0L9 805 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 DDX20Q9UHI6 824 aaKnown RBP14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 RCOR1Q9UKL0 485 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 CFAP45Q9UL16 551 aa14.3□□□□□ -0.12
CHMP2A-201ENST00000312547 CENPFP49454 3210 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 MSCO60682 206 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 BAG4O95429 457 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 CCNE2O96020 404 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 GH1P01241 217 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 CCL5P13501 91 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 CNGA1P29973 690 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 KRT85P78386 507 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 CEBPZQ03701 1054 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 LAMC2Q13753 1193 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 LRCH2Q5VUJ6 765 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 ARL6IP4Q66PJ3 421 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 LHX8Q68G74 356 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 CYFIP1Q7L576 1253 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 SDF4Q9BRK5 362 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 UPF3AQ9H1J1 476 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 JPH1Q9HDC5 661 aaPredicted RBP14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 TELO2Q9Y4R8 837 aa14.29□□□□□ -0.12
CHMP2A-201ENST00000312547 CTAGE5O15320 804 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 GAS7O60861 476 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 RARBP10826 455 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 HOXD8P13378 290 aaPredicted RBP14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 TXKP42681 527 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 GJA9P57773 515 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 PPP2R5CQ13362 524 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 KIAA1217Q5T5P2 1943 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 ZNF746Q6NUN9 644 aaPredicted RBP14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 CLEC17AQ6ZS10 378 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 TLK2Q86UE8 772 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 DHX37Q8IY37 1157 aaKnown RBP14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 LEO1Q8WVC0 666 aaPredicted RBP14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 TEKT3Q9BXF9 490 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 TTC12Q9H892 705 aaPredicted RBP14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 FBXO2Q9UK22 296 aaPredicted RBP14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 PCDHA12Q9UN75 941 aa14.28□□□□□ -0.12
CHMP2A-201ENST00000312547 BRCA2P51587 3418 aa14.27□□□□□ -0.12
CHMP2A-201ENST00000312547 SPTLC2O15270 562 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 DYNC1LI2O43237 492 aaPredicted RBP14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 MARCH6O60337 910 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 PPP6R2O75170 966 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 ADAMTS4O75173 837 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 ATG7O95352 703 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 KRT76Q01546 638 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 STK38Q15208 465 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 HSDL1Q3SXM5 330 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 DTHD1Q6ZMT9 781 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 IGSF22Q8N9C0 903 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 OR6J1Q8NGC5 347 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 PPTC7Q8NI37 304 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 KCNG4Q8TDN1 519 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 AFG1LQ8WV93 481 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 FERMT2Q96AC1 680 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 UNC45AQ9H3U1 944 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 MLXIPQ9HAP2 919 aa14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 SRPRBQ9Y5M8 271 aaKnown RBP14.27□□□□□ -0.13
CHMP2A-201ENST00000312547 ELP1O95163 1332 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 SYNRGQ9UMZ2 1314 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 MKI67P46013 3256 aaKnown RBP14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 GSTTP1A0A1W2PQM5 241 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 A6NJR5 290 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 DDX39AO00148 427 aaKnown RBP14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 SORBS3O60504 671 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 MARCKSP29966 332 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms