RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 NAF1Q96HR8 494 aaKnown RBP16.68■□□□□ 0.26
HCFC1-201ENST00000310441 PPP1R13BQ96KQ4 1090 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 EPAS1Q99814 870 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 ANXA13P27216 316 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 RASSF7Q02833 373 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 SPARCL1Q14515 664 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 ANLNQ9NQW6 1124 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 TSPOAP1O95153 1857 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 COL17A1Q9UMD9 1497 aaPredicted RBP16.67■□□□□ 0.26
HCFC1-201ENST00000310441 TRMT44Q8IYL2 757 aaKnown RBP16.67■□□□□ 0.26
HCFC1-201ENST00000310441 COG4Q9H9E3 785 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 NPC1L1Q9UHC9 1359 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 TOM1L1O75674 476 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 KRT33BQ14525 404 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 ZMYND12Q9H0C1 365 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 KHDRBS2Q5VWX1 349 aaKnown RBP16.67■□□□□ 0.26
HCFC1-201ENST00000310441 DNAJC24Q6P3W2 148 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 ZNF215Q9UL58 517 aaPredicted RBP16.67■□□□□ 0.26
HCFC1-201ENST00000310441 ZC3H18Q86VM9 953 aaKnown RBP16.67■□□□□ 0.26
HCFC1-201ENST00000310441 MCUQ8NE86 351 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 SCG3Q8WXD2 468 aaKnown RBP16.67■□□□□ 0.26
HCFC1-201ENST00000310441 IP6K1Q92551 441 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 NACC1Q96RE7 527 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 PRPSAP2O60256 369 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 NR1D1P20393 614 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 PSMD2Q13200 908 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 DLGAP5Q15398 846 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 DESI2Q9BSY9 194 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 TRPV6Q9H1D0 765 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 IKBKBO14920 756 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 GUCY2CP25092 1073 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 GCKRQ14397 625 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 KLC2Q9H0B6 622 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 KDM4CQ9H3R0 1056 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 ATP6V0A4Q9HBG4 840 aa16.67■□□□□ 0.26
HCFC1-201ENST00000310441 PAPOLAP51003 745 aaKnown RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 COPB1P53618 953 aaKnown RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 CCNA1P78396 465 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 MTHFSDQ2M296 383 aaKnown RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 KIF19Q2TAC6 998 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 DARS2Q6PI48 645 aaKnown RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 RDH13Q8NBN7 331 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 STOML1Q9UBI4 398 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 TNNQ9UQP3 1299 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 ATP8A1Q9Y2Q0 1164 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 YWHAHQ04917 246 aaPredicted RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 MIS18BP1Q6P0N0 1132 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 FKBP3Q00688 224 aaKnown RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 CCDC92Q53HC0 331 aaPredicted RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 FAM26FQ5R3K3 315 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 WDR75Q8IWA0 830 aaKnown RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 ZNF653Q96CK0 615 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 GOLGA8TH3BQL2 631 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 E2F6O75461 281 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 NCF2P19878 526 aaPredicted RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 HOMEZQ8IX15 550 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 NR2F2P24468 414 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 TFAP4Q01664 338 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 GRAMD1BQ3KR37 738 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 ODR4Q5SWX8 454 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 TGFBRAP1Q8WUH2 860 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 RUBCNQ92622 972 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 LRRC59Q96AG4 307 aaKnown RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 KIRREL3Q8IZU9 778 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 LARP4BQ92615 738 aaKnown RBP16.66■□□□□ 0.26
HCFC1-201ENST00000310441 PPP6R2O75170 966 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 STK32BQ9NY57 414 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 MPP6Q9NZW5 540 aa16.66■□□□□ 0.26
HCFC1-201ENST00000310441 PFKFB2O60825 505 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 GOLGA8FQ08AF8 430 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 GOLGA8DPQ0D2H9 430 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 MRPL28Q13084 256 aaKnown RBP16.65■□□□□ 0.26
HCFC1-201ENST00000310441 KIAA0232Q92628 1395 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 SYNMO15061 1565 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 MAN2A1Q16706 1144 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 KCTD16Q68DU8 428 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 SNX19Q92543 992 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 RPSAP08865 295 aaKnown RBP16.65■□□□□ 0.26
HCFC1-201ENST00000310441 RYBPQ8N488 228 aaPredicted RBP16.65■□□□□ 0.26
HCFC1-201ENST00000310441 NCLNQ969V3 563 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 APOBEC2Q9Y235 224 aaKnown RBP16.65■□□□□ 0.26
HCFC1-201ENST00000310441 CCDC159P0C7I6 412 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 DR1Q01658 176 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 SLC12A1Q13621 1099 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 MFSD14BQ5SR56 506 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 CAPN12Q6ZSI9 719 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 FBXO11Q86XK2 927 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 ICA1LQ8NDH6 482 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 FAM89AQ96GI7 184 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 GPBP1L1Q9HC44 474 aaPredicted RBP16.65■□□□□ 0.26
HCFC1-201ENST00000310441 ACCSQ96QU6 501 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 GCOM2Q9BZD3 368 aaPredicted RBP16.65■□□□□ 0.26
HCFC1-201ENST00000310441 GOLGA8JA6NMD2 632 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 KRT38O76015 456 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 PTK2BQ14289 1009 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 MESDQ14696 234 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms