RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 ZNF572Q7Z3I7 529 aaPredicted RBP16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 SIAH1Q8IUQ4 282 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 NELFCDQ8IXH7 590 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 CCDC65Q8IXS2 484 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 ZC3H3Q8IXZ2 948 aaKnown RBP16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 TXLNBQ8N3L3 684 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 COG1Q8WTW3 980 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 ZDHHC15Q96MV8 337 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 LSM14BQ9BX40 385 aaKnown RBP16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 GLT8D2Q9H1C3 349 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 KCTD10Q9H3F6 313 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 PSD3Q9NYI0 1048 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 NYAP2Q9P242 653 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 VPS18Q9P253 973 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 FAM198AQ9UFP1 575 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 SALL4Q9UJQ4 1053 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 FAN1Q9Y2M0 1017 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 MEIS2O14770 477 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 RAD21O60216 631 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 TLR2O60603 784 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 MAGEA1P43355 309 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 USP11P51784 963 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 TCP10Q12799 353 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 ARSHQ5FYA8 562 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 SCFD1Q8WVM8 642 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 CRYGNQ8WXF5 182 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 DRC1Q96MC2 740 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 BMP2KQ9NSY1 1161 aaPredicted RBP16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 CEP72Q9P209 647 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 ZNF646O15015 1829 aaPredicted RBP16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 FRMD3A2A2Y4 597 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 ZMYND10O75800 440 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 SLC1A4P43007 532 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 SNAP25P60880 206 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 GFPT1Q06210 699 aaPredicted RBP16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 CACNA2D4Q7Z3S7 1137 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 TRIM59Q8IWR1 403 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 ETNPPLQ8TBG4 499 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 DBNDD1Q9H9R9 158 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 NLRC4Q9NPP4 1024 aa16.82■□□□□ 0.28
SPIRE1-201ENST00000309836 ZC3H4Q9UPT8 1303 aaKnown RBP16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 SSU72P8A0A1W2PR75 194 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 POTEIP0CG38 1075 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 MYBL2P10244 700 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 MCM3P25205 808 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 SLC12A3P55017 1021 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 HNRNPH2P55795 449 aaKnown RBP16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 MARSP56192 900 aaKnown RBP16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 APBA1Q02410 837 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 SPIRE1Q08AE8 756 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 RAD51AP2Q09MP3 1159 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 CERKLQ49MI3 558 aaPredicted RBP16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 HERC4Q5GLZ8 1057 aaPredicted RBP16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 NFRKBQ6P4R8 1299 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 POTEGQ6S5H5 508 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 POTEEQ6S8J3 1075 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 ARHGAP27Q6ZUM4 889 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 GSPT2Q8IYD1 628 aaKnown RBP16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 MMGT1Q8N4V1 131 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 DHX36Q9H2U1 1008 aaKnown RBP16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 VIPAS39Q9H9C1 493 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 HPCAL4Q9UM19 191 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 ATAD5Q96QE3 1844 aa16.81■□□□□ 0.28
SPIRE1-201ENST00000309836 BRWD3Q6RI45 1802 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 G3V3G9 751 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 RBAK-RBAKDNI3L0D1 243 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 NCK2O43639 380 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 PRLRP16471 622 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 ARHGAP4P98171 946 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 FAM83BQ5T0W9 1011 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 DCAF8Q5TAQ9 597 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 MOXD1Q6UVY6 613 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 ANKRD13CQ8N6S4 541 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 FAM71BQ8TC56 605 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 SYN2Q92777 582 aaPredicted RBP16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 OSBPL9Q96SU4 736 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 KANSL2Q9H9L4 492 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 CALCOCO1Q9P1Z2 691 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 GNA14O95837 355 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 TAL1P17542 331 aaPredicted RBP16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 TNNT3P45378 269 aaPredicted RBP16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 AARSP49588 968 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 RASSF7Q02833 373 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 AP3B2Q13367 1082 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 EZH2Q15910 746 aaKnown RBP16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 MAP9Q49MG5 647 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 SFMBT2Q5VUG0 894 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 CCNI2Q6ZMN8 369 aaPredicted RBP16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 KIAA0825Q8IV33 1275 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 CCDC102AQ96A19 550 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 LENG9Q96B70 501 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 EMILIN3Q9NT22 766 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 HYOU1Q9Y4L1 999 aa16.8■□□□□ 0.28
SPIRE1-201ENST00000309836 ALDH1B1P30837 517 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 LMAN1P49257 510 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 CASP5P51878 434 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 POLR2FP61218 127 aaKnown RBP16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 PSMC6P62333 389 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms