RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 ZDHHC9Q9Y397 364 aa14.61□□□□□ -0.07
APTX-201ENST00000309615 DHX15O43143 795 aaKnown RBP14.6□□□□□ -0.07
APTX-201ENST00000309615 NEMFO60524 1076 aa14.6□□□□□ -0.07
APTX-201ENST00000309615 FARP2O94887 1054 aaPredicted RBP14.6□□□□□ -0.07
APTX-201ENST00000309615 BRD1O95696 1058 aa14.6□□□□□ -0.07
APTX-201ENST00000309615 GJA9P57773 515 aa14.6□□□□□ -0.07
APTX-201ENST00000309615 METTL7BQ6UX53 244 aa14.6□□□□□ -0.07
APTX-201ENST00000309615 UPF3AQ9H1J1 476 aaKnown RBP14.6□□□□□ -0.07
APTX-201ENST00000309615 ZSCAN16Q9H4T2 348 aaPredicted RBP14.6□□□□□ -0.07
APTX-201ENST00000309615 MLXIPQ9HAP2 919 aa14.6□□□□□ -0.07
APTX-201ENST00000309615 OGDHLQ9ULD0 1010 aa14.6□□□□□ -0.07
APTX-201ENST00000309615 DDX39AO00148 427 aaKnown RBP14.59□□□□□ -0.07
APTX-201ENST00000309615 F13A1P00488 732 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 TFRCP02786 760 aaKnown RBP14.59□□□□□ -0.07
APTX-201ENST00000309615 BEX3Q00994 111 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 SP4Q02446 784 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 LAMC2Q13753 1193 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 LRRC41Q15345 812 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 FSCN1Q16658 493 aaKnown RBP14.59□□□□□ -0.07
APTX-201ENST00000309615 HSDL1Q3SXM5 330 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 GIMAP8Q8ND71 665 aaPredicted RBP14.59□□□□□ -0.07
APTX-201ENST00000309615 AFG1LQ8WV93 481 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 HAS1Q92839 578 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 SLC5A5Q92911 643 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 EMID1Q96A84 441 aaPredicted RBP14.59□□□□□ -0.07
APTX-201ENST00000309615 SPATA33Q96N06 139 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 TMEM60Q9H2L4 133 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 CCDC85CA6NKD9 419 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 KLHDC9Q8NEP7 349 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 IPO9Q96P70 1041 aaKnown RBP14.59□□□□□ -0.07
APTX-201ENST00000309615 SDF4Q9BRK5 362 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 SPC25Q9HBM1 224 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 JPH1Q9HDC5 661 aaPredicted RBP14.59□□□□□ -0.07
APTX-201ENST00000309615 NFASCO94856 1347 aa14.59□□□□□ -0.07
APTX-201ENST00000309615 FRMPD3Q5JV73 1810 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 A6NJR5 290 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 NKX3-2P78367 333 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 CALCRLQ16602 461 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 FOXD4L6Q3SYB3 417 aaPredicted RBP14.58□□□□□ -0.08
APTX-201ENST00000309615 GNASQ5JWF2 1037 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 LRCH2Q5VUJ6 765 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 FOXD4L3Q6VB84 417 aaPredicted RBP14.58□□□□□ -0.08
APTX-201ENST00000309615 ARRDC4Q8NCT1 418 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 PPTC7Q8NI37 304 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 FTOQ9C0B1 505 aaKnown RBP eCLIP14.58□□□□□ -0.08
APTX-201ENST00000309615 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.58□□□□□ -0.08
APTX-201ENST00000309615 TBC1D22BQ9NU19 505 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 SLC9A2Q9UBY0 812 aa14.58□□□□□ -0.08
APTX-201ENST00000309615 DOCK5Q9H7D0 1870 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 TBX3O15119 743 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 GAS7O60861 476 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 PSMD10O75832 226 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 CCNE2O96020 404 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 EN2P19622 333 aaPredicted RBP14.57□□□□□ -0.08
APTX-201ENST00000309615 ORC2Q13416 577 aaPredicted RBP14.57□□□□□ -0.08
APTX-201ENST00000309615 CCSAPQ6IQ19 270 aaPredicted RBP14.57□□□□□ -0.08
APTX-201ENST00000309615 RNF180Q86T96 592 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 C4orf32Q8N8J7 132 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 FAM20AQ96MK3 541 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 MTMR9Q96QG7 549 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 RIT2Q99578 217 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 NOP56O00567 594 aaKnown RBP14.57□□□□□ -0.08
APTX-201ENST00000309615 MARCH6O60337 910 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 MMP3P08254 477 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 CST5P28325 142 aaPredicted RBP14.57□□□□□ -0.08
APTX-201ENST00000309615 MNX1P50219 401 aaPredicted RBP14.57□□□□□ -0.08
APTX-201ENST00000309615 CPT1AP50416 773 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 PTGDRQ13258 359 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 KCNA10Q16322 511 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 GPR20Q99678 358 aa14.57□□□□□ -0.08
APTX-201ENST00000309615 DNM1LO00429 736 aa14.56□□□□□ -0.08
APTX-201ENST00000309615 TXKP42681 527 aa14.56□□□□□ -0.08
APTX-201ENST00000309615 SOX10P56693 466 aa14.56□□□□□ -0.08
APTX-201ENST00000309615 ACTR2P61160 394 aa14.56□□□□□ -0.08
APTX-201ENST00000309615 SLFN12Q8IYM2 578 aa14.56□□□□□ -0.08
APTX-201ENST00000309615 TEKT3Q9BXF9 490 aa14.56□□□□□ -0.08
APTX-201ENST00000309615 UNC45AQ9H3U1 944 aa14.56□□□□□ -0.08
APTX-201ENST00000309615 VAV3Q9UKW4 847 aa14.56□□□□□ -0.08
APTX-201ENST00000309615 CLIC4Q9Y696 253 aa14.56□□□□□ -0.08
APTX-201ENST00000309615 KIAA0100Q14667 2235 aaKnown RBP14.56□□□□□ -0.08
APTX-201ENST00000309615 CHMP2AO43633 222 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 BAG4O95429 457 aaKnown RBP14.55□□□□□ -0.08
APTX-201ENST00000309615 ASGR1P07306 291 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 OR52Z1P0C646 297 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 HOXD8P13378 290 aaPredicted RBP14.55□□□□□ -0.08
APTX-201ENST00000309615 CEBPZQ03701 1054 aaKnown RBP14.55□□□□□ -0.08
APTX-201ENST00000309615 SF3A1Q15459 793 aaKnown RBP14.55□□□□□ -0.08
APTX-201ENST00000309615 DGKDQ16760 1214 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 BRDTQ58F21 947 aaPredicted RBP14.55□□□□□ -0.08
APTX-201ENST00000309615 PCSK9Q8NBP7 692 aaKnown RBP14.55□□□□□ -0.08
APTX-201ENST00000309615 DIS3LQ8TF46 1054 aaKnown RBP14.55□□□□□ -0.08
APTX-201ENST00000309615 ELP1O95163 1332 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 GSTTP1A0A1W2PQM5 241 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 KBTBD13C9JR72 458 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 PPFIA4O75335 1185 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 MYL3P08590 195 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 ZNF286BP0CG31 522 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 TCF7P36402 384 aaPredicted RBP14.55□□□□□ -0.08
APTX-201ENST00000309615 NUCB2P80303 420 aa14.55□□□□□ -0.08
APTX-201ENST00000309615 KRT76Q01546 638 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms