RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 ADKP55263 362 aaKnown RBP16.58■□□□□ 0.24
LEMD3-201ENST00000308330 REXO1Q8N1G1 1221 aaKnown RBP16.58■□□□□ 0.24
LEMD3-201ENST00000308330 CMTR1Q8N1G2 835 aaKnown RBP16.58■□□□□ 0.24
LEMD3-201ENST00000308330 LRRC8CQ8TDW0 803 aa16.58■□□□□ 0.24
LEMD3-201ENST00000308330 NUF2Q9BZD4 464 aa16.58■□□□□ 0.24
LEMD3-201ENST00000308330 KIDINS220Q9ULH0 1771 aa16.58■□□□□ 0.24
LEMD3-201ENST00000308330 CPP00450 1065 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 GSTA2P09210 222 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 CHRNA5P30532 468 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 ANKRD35Q8N283 1001 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 VPS54Q9P1Q0 977 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 KCNJ14Q9UNX9 436 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 FRMPD2Q68DX3 1309 aaPredicted RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 RCN2Q14257 317 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 MIGA2Q7L4E1 593 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 NUDCD3Q8IVD9 361 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 PRPF31Q8WWY3 499 aaKnown RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 PTPRUQ92729 1446 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 RGS16O15492 202 aaPredicted RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 STK10O94804 968 aaKnown RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 ESRRGP62508 458 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 KIF22Q14807 665 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 WDR60Q8WVS4 1066 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 ABT1Q9ULW3 272 aaKnown RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 SSH2Q76I76 1423 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 RTN3O95197 1032 aaPredicted RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 ZNF473Q8WTR7 871 aaKnown RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
LEMD3-201ENST00000308330 CATSPER2Q96P56 530 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 SLC5A4Q9NY91 659 aa16.57■□□□□ 0.24
LEMD3-201ENST00000308330 RIMS1Q86UR5 1692 aaKnown RBP16.56■□□□□ 0.24
LEMD3-201ENST00000308330 ITGB3BPQ13352 177 aaPredicted RBP16.56■□□□□ 0.24
LEMD3-201ENST00000308330 CWF19L1Q69YN2 538 aaKnown RBP16.56■□□□□ 0.24
LEMD3-201ENST00000308330 PODNQ7Z5L7 613 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 DRAXINQ8NBI3 349 aaPredicted RBP16.56■□□□□ 0.24
LEMD3-201ENST00000308330 ANGPTL2Q9UKU9 493 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 FMNL1O95466 1100 aaPredicted RBP16.56■□□□□ 0.24
LEMD3-201ENST00000308330 ADD1P35611 737 aaKnown RBP16.56■□□□□ 0.24
LEMD3-201ENST00000308330 TBC1D10BQ4KMP7 808 aaPredicted RBP16.56■□□□□ 0.24
LEMD3-201ENST00000308330 KRT40Q6A162 431 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 KRT25Q7Z3Z0 450 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 IMPG2Q9BZV3 1241 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 EPN3Q9H201 632 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 AZI2Q9H6S1 392 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 VIPAS39Q9H9C1 493 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 INTS9Q9NV88 658 aaKnown RBP16.56■□□□□ 0.24
LEMD3-201ENST00000308330 HDAC6Q9UBN7 1215 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 A0A0G2JLW4 131 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 GDF11O95390 407 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 MADDQ8WXG6 1647 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 SMCO2A6NFE2 343 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 MSH2P43246 934 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 SLC35F6Q8N357 371 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 FANCBQ8NB91 859 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 SYNCQ9H7C4 482 aa16.56■□□□□ 0.24
LEMD3-201ENST00000308330 PRKAB2O43741 272 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 HARSP12081 509 aaKnown RBP16.55■□□□□ 0.24
LEMD3-201ENST00000308330 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 ANKRD20A3Q5VUR7 823 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 NCAPG2Q86XI2 1143 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 MGARPQ8TDB4 240 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 HINFPQ9BQA5 517 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 SLF1Q9BQI6 1058 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 FUT8Q9BYC5 575 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 SPC25Q9HBM1 224 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 A1CFQ9NQ94 594 aaKnown RBP16.55■□□□□ 0.24
LEMD3-201ENST00000308330 STAP2Q9UGK3 403 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 CEP170BQ9Y4F5 1589 aaPredicted RBP16.55■□□□□ 0.24
LEMD3-201ENST00000308330 CROCC2H7BZ55 1655 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 STX2P32856 288 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 TM6SF1Q9BZW5 370 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 CD209Q9NNX6 404 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 CACNB3P54284 484 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 AOC3Q16853 763 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 MAP3K21Q5TCX8 1036 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.55■□□□□ 0.243e-6■■■■■ 50.8
LEMD3-201ENST00000308330 PHACTR1Q9C0D0 580 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 NRDE2Q9H7Z3 1164 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 CNOT10Q9H9A5 744 aaKnown RBP16.55■□□□□ 0.24
LEMD3-201ENST00000308330 CD2APQ9Y5K6 639 aa16.55■□□□□ 0.24
LEMD3-201ENST00000308330 ATP10DQ9P241 1426 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 JAK2O60674 1132 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 CFAP221Q4G0U5 840 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 TTC38Q5R3I4 469 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 APBB1IPQ7Z5R6 666 aaPredicted RBP16.54■□□□□ 0.24
LEMD3-201ENST00000308330 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 PDP2Q9P2J9 529 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 RC3H1Q5TC82 1133 aaKnown RBP16.54■□□□□ 0.24
LEMD3-201ENST00000308330 NCAPH2Q6IBW4 605 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 TTC16Q8NEE8 873 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 GIMAP4Q9NUV9 329 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 TBC1D23Q9NUY8 699 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 PIK3C2BO00750 1634 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 ADD2P35612 726 aa16.54■□□□□ 0.24
LEMD3-201ENST00000308330 NLRP12P59046 1061 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms