RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SMC1BQ8NDV3 1235 aa19.65■□□□□ 0.74
KRT28-201ENST00000306658 LRRC15Q8TF66 581 aa19.65■□□□□ 0.74
KRT28-201ENST00000306658 RAD54LQ92698 747 aa19.65■□□□□ 0.74
KRT28-201ENST00000306658 PARK7Q99497 189 aaKnown RBP19.65■□□□□ 0.74
KRT28-201ENST00000306658 POLR3CQ9BUI4 534 aaPredicted RBP19.65■□□□□ 0.74
KRT28-201ENST00000306658 AGO4Q9HCK5 861 aaKnown RBP19.65■□□□□ 0.74
KRT28-201ENST00000306658 BLOC1S4Q9NUP1 217 aa19.65■□□□□ 0.74
KRT28-201ENST00000306658 KIAA1024Q9UPX6 916 aa19.65■□□□□ 0.74
KRT28-201ENST00000306658 BECN2A8MW95 431 aa19.64■□□□□ 0.73
KRT28-201ENST00000306658 B4DLN1 442 aa19.64■□□□□ 0.73
KRT28-201ENST00000306658 KCTD2Q14681 263 aa19.64■□□□□ 0.73
KRT28-201ENST00000306658 CATSPER3Q86XQ3 398 aa19.64■□□□□ 0.73
KRT28-201ENST00000306658 RASAL3Q86YV0 1011 aa19.64■□□□□ 0.73
KRT28-201ENST00000306658 FAM43AQ8N2R8 423 aa19.64■□□□□ 0.73
KRT28-201ENST00000306658 CDHR1Q96JP9 859 aa19.64■□□□□ 0.73
KRT28-201ENST00000306658 INPP4AQ96PE3 977 aaPredicted RBP19.64■□□□□ 0.73
KRT28-201ENST00000306658 MANSC4A6NHS7 340 aaPredicted RBP19.63■□□□□ 0.73
KRT28-201ENST00000306658 GOLGA6L19H0YKK7 550 aa19.63■□□□□ 0.73
KRT28-201ENST00000306658 RPN1P04843 607 aaKnown RBP19.63■□□□□ 0.73
KRT28-201ENST00000306658 CNTN2Q02246 1040 aa19.63■□□□□ 0.73
KRT28-201ENST00000306658 IQCB1Q15051 598 aa19.63■□□□□ 0.73
KRT28-201ENST00000306658 STXBP2Q15833 593 aa19.63■□□□□ 0.73
KRT28-201ENST00000306658 ECM1Q16610 540 aa19.63■□□□□ 0.73
KRT28-201ENST00000306658 GNPTABQ3T906 1256 aa19.63■□□□□ 0.73
KRT28-201ENST00000306658 CCDC47Q96A33 483 aaKnown RBP19.63■□□□□ 0.73
KRT28-201ENST00000306658 MPHOSPH6Q99547 160 aaKnown RBP19.63■□□□□ 0.73
KRT28-201ENST00000306658 C7orf25Q9BPX7 421 aa19.63■□□□□ 0.73
KRT28-201ENST00000306658 EIF2AK1Q9BQI3 630 aaKnown RBP19.63■□□□□ 0.73
KRT28-201ENST00000306658 POTEB3A0JP26 581 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 CHMP2AO43633 222 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 MED24O75448 989 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 FCER1AP12319 257 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 MCM6Q14566 821 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 POTEBQ6S5H4 581 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 MMP19Q99542 508 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 PTPN18Q99952 460 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 TRIM9Q9C026 710 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 TUFT1Q9NNX1 390 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 EML1O00423 815 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 KIF3CO14782 793 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 EIF3JO75822 258 aaKnown RBP19.62■□□□□ 0.73
KRT28-201ENST00000306658 SPATA31C1P0DKV0 1188 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 BMP6P22004 513 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 MUTP22033 750 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 ALDH5A1P51649 535 aaPredicted RBP19.62■□□□□ 0.73
KRT28-201ENST00000306658 DHX8Q14562 1220 aaKnown RBP19.62■□□□□ 0.73
KRT28-201ENST00000306658 EPHA7Q15375 998 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 CT47A1Q5JQC4 288 aaPredicted RBP19.62■□□□□ 0.73
KRT28-201ENST00000306658 WDR78Q5VTH9 848 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 B3GNT9Q6UX72 402 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 ANKRD13CQ8N6S4 541 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 FAM133AQ8N9E0 248 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 HSD17B14Q9BPX1 270 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 UNC45AQ9H3U1 944 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 MORF4L1Q9UBU8 362 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 TCEAL9Q9UHQ7 104 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 DNM3Q9UQ16 869 aa19.62■□□□□ 0.73
KRT28-201ENST00000306658 SMTNL1A8MU46 457 aa19.61■□□□□ 0.73
KRT28-201ENST00000306658 DHX15O43143 795 aaKnown RBP19.61■□□□□ 0.73
KRT28-201ENST00000306658 KCNB1Q14721 858 aa19.61■□□□□ 0.73
KRT28-201ENST00000306658 KCNK18Q7Z418 384 aa19.61■□□□□ 0.73
KRT28-201ENST00000306658 GTPBP4Q9BZE4 634 aaKnown RBP19.61■□□□□ 0.73
KRT28-201ENST00000306658 ZCCHC17Q9NP64 241 aaKnown RBP19.61■□□□□ 0.73
KRT28-201ENST00000306658 BMP2KQ9NSY1 1161 aaPredicted RBP19.61■□□□□ 0.73
KRT28-201ENST00000306658 PKD2L1Q9P0L9 805 aa19.61■□□□□ 0.73
KRT28-201ENST00000306658 TLL2Q9Y6L7 1015 aa19.61■□□□□ 0.73
KRT28-201ENST00000306658 INHBEP58166 350 aa19.6■□□□□ 0.73
KRT28-201ENST00000306658 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
KRT28-201ENST00000306658 MIER3Q7Z3K6 550 aa19.6■□□□□ 0.73
KRT28-201ENST00000306658 DHX40Q8IX18 779 aaKnown RBP19.6■□□□□ 0.73
KRT28-201ENST00000306658 AOPEPQ8N6M6 819 aa19.6■□□□□ 0.73
KRT28-201ENST00000306658 NEK9Q8TD19 979 aa19.6■□□□□ 0.73
KRT28-201ENST00000306658 LCTP09848 1927 aa19.6■□□□□ 0.73
KRT28-201ENST00000306658 POTEFA5A3E0 1075 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 SOWAHBA6NEL2 793 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 E9PMD0 336 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 DDX39AO00148 427 aaKnown RBP19.59■□□□□ 0.73
KRT28-201ENST00000306658 SLITRK3O94933 977 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 ASIC1P78348 528 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 CYP4A11Q02928 519 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 PDE4DQ08499 809 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 CNNM4Q6P4Q7 775 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 POTEGQ6S5H5 508 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 CCDC102AQ96A19 550 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 PORCNQ9H237 461 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 ASTN1O14525 1302 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 DNAJC25-GNG10A0A024R161 153 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 IKBKBO14920 756 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 RGS20O76081 388 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 SLC10A3P09131 477 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 PLA2G4BP0C869 781 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 EDNRBP24530 442 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 TPM4P67936 248 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 KRT76Q01546 638 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 ZNF658Q5TYW1 1059 aaPredicted RBP19.59■□□□□ 0.73
KRT28-201ENST00000306658 TPH2Q8IWU9 490 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 DYDC2Q96IM9 177 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 R3HDMLQ9H3Y0 253 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 EFCC1Q9HA90 598 aa19.59■□□□□ 0.73
KRT28-201ENST00000306658 RGL1Q9NZL6 768 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms