RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TAF1DQ9H5J8 278 aaPredicted RBP10.18□□□□□ -0.78
PTPRE-202ENST00000306042 OSTNP61366 133 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 PSMC5P62195 406 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 HERVK_113P62684 666 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 KIF5AQ12840 1032 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 CUL4AQ13619 759 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 ADGRA1Q86SQ6 560 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 CNGA4Q8IV77 575 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 GJB4Q9NTQ9 266 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 HESX1Q9UBX0 185 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 TRIM17Q9Y577 477 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 WTIPA6NIX2 430 aaPredicted RBP10.18□□□□□ -0.78
PTPRE-202ENST00000306042 GADD45BO75293 160 aaPredicted RBP10.18□□□□□ -0.78
PTPRE-202ENST00000306042 TNNC1P63316 161 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 VGLL4Q14135 290 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 PROCA1Q8NCQ7 364 aaPredicted RBP10.18□□□□□ -0.78
PTPRE-202ENST00000306042 GBP3Q9H0R5 595 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 ST7Q9NRC1 585 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 TAB2Q9NYJ8 693 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 POTEMA6NI47 508 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 ICAM1P05362 532 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 PLCG1P19174 1290 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 ORC2Q13416 577 aaPredicted RBP10.18□□□□□ -0.78
PTPRE-202ENST00000306042 MAPK6Q16659 721 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 ARHGAP44Q17R89 818 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 TRMT44Q8IYL2 757 aaKnown RBP10.18□□□□□ -0.78
PTPRE-202ENST00000306042 KIAA1683Q9H0B3 1180 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 PPP1R9AQ9ULJ8 1098 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 A0A1W2PQ27 194 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 A0A1W2PQ64 194 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 A0A1W2PQD8 194 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 PEX3P56589 373 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 TNFAIP2Q03169 654 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 CCDC50Q8IVM0 306 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 VGLL2Q8N8G2 317 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 IPO4Q8TEX9 1081 aaKnown RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 SEPT1Q8WYJ6 367 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 JMJD4Q9H9V9 463 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 KIAA1468Q9P260 1216 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 SRPRBQ9Y5M8 271 aaKnown RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 URI1O94763 535 aaPredicted RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 SRGAP2BP0DMP2 458 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 KCNJ6P48051 423 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 NDUFA8P51970 172 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 TFAMQ00059 246 aaKnown RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 EXOSC10Q01780 885 aaKnown RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 CERS5Q8N5B7 392 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 DYDC2Q96IM9 177 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 GCOM2Q9BZD3 368 aaPredicted RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 TMX1Q9H3N1 280 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 DDX4Q9NQI0 724 aaKnown RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 FZD1Q9UP38 647 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 INPP5FQ9Y2H2 1132 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 PHLPP2Q6ZVD8 1323 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 ZNF541Q9H0D2 1346 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 RPS6P62753 249 aaKnown RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 PLCB3Q01970 1234 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 ASIC2Q16515 512 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 RHPN2Q8IUC4 686 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 TRIML1Q8N9V2 468 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 LINC00301Q8NCQ3 95 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 MTRQ99707 1265 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 SMARCAD1Q9H4L7 1026 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 GOLGA6L10A0A0M3HER8 536 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 ERLIN1O75477 346 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 CPT1AP50416 773 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 IFRD2Q12894 506 aaPredicted RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 PPFIA1Q13136 1202 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 PPIL2Q13356 520 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 ALCAMQ13740 583 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 SLC9C1Q4G0N8 1177 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 PADI6Q6TGC4 694 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 ARRDC4Q8NCT1 418 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 OXER1Q8TDS5 423 aa10.17□□□□□ -0.78
PTPRE-202ENST00000306042 TOPORSQ9NS56 1045 aaPredicted RBP10.17□□□□□ -0.78
PTPRE-202ENST00000306042 ANKRD26Q9UPS8 1709 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 TACC1O75410 805 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 PIK3CAP42336 1068 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 TRIM14Q14142 442 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 IGSF22Q8N9C0 903 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 MAP3K14Q99558 947 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 NUP58Q9BVL2 599 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 RPF1Q9H9Y2 349 aaKnown RBP10.16□□□□□ -0.78
PTPRE-202ENST00000306042 KRT86O43790 486 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 TDP2O95551 362 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 SLFN12LQ6IEE8 588 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 DCUN1D2Q6PH85 259 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 KIF18AQ8NI77 898 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 NAA15Q9BXJ9 866 aaKnown RBP10.16□□□□□ -0.78
PTPRE-202ENST00000306042 NMRK2Q9NPI5 230 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 MYL1P05976 194 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 SMARCA1P28370 1054 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 GBP2P32456 591 aaPredicted RBP10.16□□□□□ -0.78
PTPRE-202ENST00000306042 ELF1P32519 619 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 PSMC4P43686 418 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 APLP1P51693 650 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 ARPP19P56211 112 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 XRRA1Q6P2D8 792 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 POTEDQ86YR6 584 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 NKX2-3Q8TAU0 364 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms