RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 POLR3EQ9NVU0 708 aa10.01□□□□□ -0.81
VPREB1-201ENST00000302273 PCDHA12Q9UN75 941 aa10.01□□□□□ -0.81
VPREB1-201ENST00000302273 NOP56O00567 594 aaKnown RBP10□□□□□ -0.81
VPREB1-201ENST00000302273 ADAMTS3O15072 1205 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 MSH4O15457 936 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 DHX15O43143 795 aaKnown RBP10□□□□□ -0.81
VPREB1-201ENST00000302273 DYNC1LI2O43237 492 aaPredicted RBP10□□□□□ -0.81
VPREB1-201ENST00000302273 SLC26A4O43511 780 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 NEMFO60524 1076 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 DKC1O60832 514 aaKnown RBP eCLIP10□□□□□ -0.81
VPREB1-201ENST00000302273 ADAMTS4O75173 837 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 ATG7O95352 703 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 F13A1P00488 732 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 TFRCP02786 760 aaKnown RBP10□□□□□ -0.81
VPREB1-201ENST00000302273 UBA1P22314 1058 aaKnown RBP10□□□□□ -0.81
VPREB1-201ENST00000302273 TOB1P50616 345 aaPredicted RBP10□□□□□ -0.81
VPREB1-201ENST00000302273 JAK3P52333 1124 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 SP2Q02086 613 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 ARHGAP1Q07960 439 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 SEMA3FQ13275 785 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 PPP2R5CQ13362 524 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 MTFR1Q15390 333 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 NFKBIBQ15653 356 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 FSCN1Q16658 493 aaKnown RBP10□□□□□ -0.81
VPREB1-201ENST00000302273 LY6KQ17RY6 165 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 EARS2Q5JPH6 523 aaKnown RBP10□□□□□ -0.81
VPREB1-201ENST00000302273 GNASQ5JWF2 1037 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 C1orf53Q5VUE5 145 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 CCSAPQ6IQ19 270 aaPredicted RBP10□□□□□ -0.81
VPREB1-201ENST00000302273 CYP2W1Q8TAV3 490 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 ETNPPLQ8TBG4 499 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 PGBD1Q96JS3 809 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 SPATA33Q96N06 139 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 KATNAL1Q9BW62 490 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 SLC9A2Q9UBY0 812 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 ELP1O95163 1332 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 PDE4DIPQ5VU43 2346 aa10□□□□□ -0.81
VPREB1-201ENST00000302273 MKI67P46013 3256 aaKnown RBP9.99□□□□□ -0.81
VPREB1-201ENST00000302273 WDR64B1ANS9 1081 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 KIF28PB7ZC32 967 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 MARCH6O60337 910 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 GAS7O60861 476 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 ATP9AO75110 1047 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 PSMD10O75832 226 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 ARIH2O95376 493 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 TDP2O95551 362 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 GGPS1O95749 300 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 OR52Z1P0C646 297 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 ARP10275 920 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 MUTP22033 750 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 MLLT1Q03111 559 aaPredicted RBP9.99□□□□□ -0.81
VPREB1-201ENST00000302273 RESTQ13127 1097 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 CALCRLQ16602 461 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 LRCH2Q5VUJ6 765 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 MIS18BP1Q6P0N0 1132 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 B3GNT9Q6UX72 402 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 PLPPR4Q7Z2D5 763 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 OR6J1Q8NGC5 347 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 NEK9Q8TD19 979 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 FERMT2Q96AC1 680 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 TEKT3Q9BXF9 490 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 FOXD4L1Q9NU39 408 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 PHF24Q9UPV7 400 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 PCDHA10Q9Y5I2 948 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 SYNRGQ9UMZ2 1314 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 BRCA2P51587 3418 aa9.99□□□□□ -0.81
VPREB1-201ENST00000302273 MYH6P13533 1939 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 IGKV6D-21A0A0A0MT36 114 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 KBTBD13C9JR72 458 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 CTAGE5O15320 804 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 RPLP2P05387 115 aaKnown RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 PSAPP07602 524 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 C6orf222P0C671 652 aaPredicted RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 MCM7P33993 719 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 FXR2P51116 673 aaKnown RBP eCLIP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 ATP2C1P98194 919 aaPredicted RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 PTPN11Q06124 597 aaPredicted RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 ITGB3BPQ13352 177 aaPredicted RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 LRRC41Q15345 812 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 TMEM266Q2M3C6 531 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 DTHD1Q6ZMT9 781 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 FAM43BQ6ZT52 329 aaPredicted RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 CYFIP1Q7L576 1253 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 C4orf32Q8N8J7 132 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 AFAP1L1Q8TED9 768 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 HAS1Q92839 578 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 AK8Q96MA6 479 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 GLT1D1Q96MS3 346 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 GPR20Q99678 358 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 SCAND2PQ9GZW5 306 aaPredicted RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 SMARCAD1Q9H4L7 1026 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 AZI2Q9H6S1 392 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 TTC12Q9H892 705 aaPredicted RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 ZNF215Q9UL58 517 aaPredicted RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 PPME1Q9Y570 386 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 EMSYQ7Z589 1322 aa9.98□□□□□ -0.81
VPREB1-201ENST00000302273 RBBP6Q7Z6E9 1792 aaKnown RBP9.98□□□□□ -0.81
VPREB1-201ENST00000302273 SMCHD1A6NHR9 2005 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms